T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2394..13017
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS892_RS00005 (PTB30_p01) | 1..1224 | - | 1224 | WP_011013257 | plasmid replication initiator TrfA | - |
| HS892_RS00010 (PTB30_p02) | 1273..1611 | - | 339 | WP_011013259 | single-stranded DNA-binding protein | - |
| HS892_RS00015 (PTB30_p03) | 1720..2079 | + | 360 | WP_011013260 | transcriptional regulator | - |
| HS892_RS00020 (PTB30_p04) | 2394..3359 | + | 966 | WP_014386235 | P-type conjugative transfer ATPase TrbB | virB11 |
| HS892_RS00025 (PTB30_p05) | 3389..3853 | + | 465 | WP_011013262 | conjugal transfer system pilin TrbC | virB2 |
| HS892_RS00030 (PTB30_p06) | 3857..4168 | + | 312 | WP_011013263 | conjugal transfer protein TrbD | virB3 |
| HS892_RS00035 (PTB30_p07) | 4165..6723 | + | 2559 | WP_011013264 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS892_RS00040 (PTB30_p08) | 6720..7508 | + | 789 | WP_011013265 | conjugal transfer protein TrbF | virB8 |
| HS892_RS00045 (PTB30_p09) | 7526..8419 | + | 894 | WP_014386236 | P-type conjugative transfer protein TrbG | virB9 |
| HS892_RS00050 (PTB30_p10) | 8422..8883 | + | 462 | WP_011013267 | lipoprotein | - |
| HS892_RS00055 (PTB30_p11) | 8887..10266 | + | 1380 | WP_012478192 | TrbI/VirB10 family protein | virB10 |
| HS892_RS00060 (PTB30_p12) | 10283..11056 | + | 774 | WP_011255135 | P-type conjugative transfer protein TrbJ | virB5 |
| HS892_RS00065 | 11066..11287 | + | 222 | WP_011255136 | entry exclusion lipoprotein TrbK | - |
| HS892_RS00070 (PTB30_p14) | 11299..13017 | + | 1719 | WP_012478193 | P-type conjugative transfer protein TrbL | virB6 |
| HS892_RS00075 (PTB30_p15) | 13036..13614 | + | 579 | WP_011255138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS892_RS00080 (PTB30_p16) | 13616..14251 | + | 636 | WP_011255139 | transglycosylase SLT domain-containing protein | - |
| HS892_RS00085 (PTB30_p17) | 14281..14550 | + | 270 | WP_011255140 | hypothetical protein | - |
| HS892_RS00090 (PTB30_p18) | 14547..15245 | + | 699 | WP_012478194 | TraX family protein | - |
| HS892_RS00095 (PTB30_p19) | 15261..15704 | + | 444 | WP_011255142 | OmpA family protein | - |
| HS892_RS00100 (PTB30_p20) | 15807..16223 | + | 417 | WP_012478195 | hypothetical protein | - |