T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 57202..99245
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTV48_RS00350 | 54918..57209 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| HTV48_RS00355 | 57202..58272 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| HTV48_RS00360 | 58291..59499 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| HTV48_RS00365 | 59791..59943 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HTV48_RS00370 | 60015..60266 | - | 252 | WP_001291964 | hypothetical protein | - |
| HTV48_RS00645 | 60765..60860 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| HTV48_RS00375 | 60925..61101 | - | 177 | WP_001054904 | hypothetical protein | - |
| HTV48_RS00380 | 61493..61702 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HTV48_RS00385 | 61774..62448 | - | 675 | WP_223866377 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HTV48_RS00390 | 62498..64666 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| HTV48_RS00395 | 64763..65347 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HTV48_RS00400 | 65376..66578 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| HTV48_RS00405 | 66545..67159 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| HTV48_RS00410 | 67159..70203 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| HTV48_RS00415 | 70293..71093 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HTV48_RS00420 | 71077..71265 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HTV48_RS00425 | 71329..71733 | - | 405 | WP_181365388 | IncI1-type conjugal transfer protein TraR | traR |
| HTV48_RS00430 | 71784..72311 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HTV48_RS00435 | 72311..73015 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HTV48_RS00440 | 73015..74304 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| HTV48_RS00445 | 74307..75290 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| HTV48_RS00450 | 75301..75993 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| HTV48_RS00455 | 75990..76337 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HTV48_RS00460 | 76355..80122 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| HTV48_RS00465 | 80211..80762 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| HTV48_RS00470 | 80777..81067 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HTV48_RS00475 | 81064..82212 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HTV48_RS00480 | 82209..83027 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HTV48_RS00485 | 83024..83482 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HTV48_RS00490 | 83877..84461 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| HTV48_RS00495 | 84521..85723 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HTV48_RS00500 | 85808..86632 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HTV48_RS00505 | 86783..87937 | - | 1155 | WP_001139957 | site-specific integrase | - |
| HTV48_RS00640 | 88255..88464 | - | 210 | Protein_100 | hypothetical protein | - |
| HTV48_RS00510 | 88464..88808 | + | 345 | Protein_101 | WbuC family cupin fold metalloprotein | - |
| HTV48_RS00515 | 88855..89730 | - | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| HTV48_RS00520 | 90018..90701 | - | 684 | Protein_103 | IS1380-like element ISEcp1 family transposase | - |
| HTV48_RS00525 | 90735..91703 | + | 969 | WP_000654811 | IS5 family transposase | - |
| HTV48_RS00530 | 91755..92345 | - | 591 | Protein_105 | IS1380-like element ISEcp1 family transposase | - |
| HTV48_RS00660 | 93094..93318 | + | 225 | Protein_106 | hypothetical protein | - |
| HTV48_RS00540 | 93315..94739 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTV48_RS00545 | 94739..95395 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HTV48_RS00550 | 95380..95940 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HTV48_RS00555 | 95950..96564 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HTV48_RS00560 | 96582..97679 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HTV48_RS00565 | 97692..99245 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTV48_RS00570 | 99256..99708 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| HTV48_RS00575 | 99695..100990 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| HTV48_RS00580 | 100983..102665 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HTV48_RS00585 | 102679..103116 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HTV48_RS00590 | 103116..104183 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |