T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 463..18353
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6849_RS00005 | 1..169 | + | 169 | Protein_0 | DUF945 domain-containing protein | - |
| G6849_RS00010 (G6849_00023) | 463..1065 | - | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | virB1 |
| G6849_RS00015 (G6849_00024) | 1387..1770 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| G6849_RS00020 (G6849_00025) | 1964..2635 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| G6849_RS00025 | 2772..2999 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| G6849_RS00030 (G6849_00026) | 3032..3391 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| G6849_RS00035 (G6849_00027) | 3406..3717 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| G6849_RS00040 (G6849_00028) | 3739..4305 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| G6849_RS00045 (G6849_00029) | 4292..5020 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| G6849_RS00050 (G6849_00030) | 5020..6471 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| G6849_RS00055 (G6849_00031) | 6461..7027 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| G6849_RS00060 (G6849_00032) | 7014..7334 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| G6849_RS00065 (G6849_00033) | 7331..7846 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| G6849_RS00070 | 7981..8202 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| G6849_RS00075 (G6849_00034) | 8195..8608 | + | 414 | WP_000549589 | hypothetical protein | - |
| G6849_RS00080 (G6849_00035) | 8601..9074 | + | 474 | WP_000549568 | hypothetical protein | - |
| G6849_RS00085 (G6849_00036) | 9154..9372 | + | 219 | WP_000556745 | hypothetical protein | - |
| G6849_RS00090 (G6849_00037) | 9400..9747 | + | 348 | WP_000836682 | hypothetical protein | - |
| G6849_RS00095 (G6849_00038) | 9873..12503 | + | 2631 | WP_012917677 | type IV secretion system protein TraC | virb4 |
| G6849_RS00100 (G6849_00039) | 12500..12886 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| G6849_RS00105 (G6849_00040) | 12883..13515 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| G6849_RS00110 (G6849_00041) | 13512..14504 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| G6849_RS00115 (G6849_00042) | 14534..14839 | + | 306 | WP_000224416 | hypothetical protein | - |
| G6849_RS00120 (G6849_00043) | 14848..15486 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| G6849_RS00125 (G6849_00044) | 15483..17333 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| G6849_RS00130 (G6849_00045) | 17360..17617 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| G6849_RS00135 (G6849_00046) | 17610..18353 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| G6849_RS00140 (G6849_00047) | 18367..18711 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| G6849_RS00145 (G6849_00048) | 18830..19114 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G6849_RS00150 | 19101..19327 | + | 227 | Protein_29 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |