T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40005..68175
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTM59_RS00510 | 35094..35390 | - | 297 | Protein_49 | hypothetical protein | - |
| HTM59_RS00255 | 35890..36120 | + | 231 | WP_000218642 | hypothetical protein | - |
| HTM59_RS00260 | 36172..37533 | + | 1362 | WP_000170695 | DUF3560 domain-containing protein | - |
| HTM59_RS00265 | 37580..38143 | + | 564 | WP_015059007 | class I SAM-dependent methyltransferase | - |
| HTM59_RS00525 | 38143..38400 | + | 258 | Protein_53 | hypothetical protein | - |
| HTM59_RS00275 | 38480..38776 | + | 297 | WP_001272251 | hypothetical protein | - |
| HTM59_RS00280 | 38887..39708 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| HTM59_RS00285 | 40005..40652 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| HTM59_RS00290 | 40929..41312 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTM59_RS00295 | 41503..42189 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| HTM59_RS00300 | 42283..42510 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| HTM59_RS00305 | 42544..42909 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| HTM59_RS00310 | 42924..43235 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HTM59_RS00315 | 43257..43823 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| HTM59_RS00320 | 43810..44538 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HTM59_RS00325 | 44538..45965 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTM59_RS00330 | 45955..46545 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTM59_RS00335 | 46532..46729 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| HTM59_RS00340 | 46741..46992 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| HTM59_RS00345 | 46989..47504 | + | 516 | WP_000809902 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTM59_RS00350 | 47639..47860 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| HTM59_RS00355 | 48020..50647 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| HTM59_RS00360 | 50644..51030 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| HTM59_RS00365 | 51027..51659 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| HTM59_RS00370 | 51656..52648 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HTM59_RS00375 | 52675..52983 | + | 309 | WP_000412447 | hypothetical protein | - |
| HTM59_RS00380 | 53046..53567 | + | 522 | WP_015059014 | hypothetical protein | - |
| HTM59_RS00385 | 53594..54232 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTM59_RS00390 | 54229..54600 | + | 372 | WP_000056336 | hypothetical protein | - |
| HTM59_RS00395 | 54626..55048 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| HTM59_RS00400 | 55045..56895 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTM59_RS00405 | 56922..57179 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| HTM59_RS00410 | 57172..57915 | + | 744 | WP_015059017 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTM59_RS00415 | 58076..58312 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTM59_RS00420 | 58299..58844 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTM59_RS00425 | 58834..59148 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| HTM59_RS00430 | 59102..59494 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| HTM59_RS00435 | 59481..60854 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| HTM59_RS00440 | 60851..63667 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTM59_RS00445 | 63700..64221 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| HTM59_RS00450 | 64246..64977 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| HTM59_RS00455 | 65180..65917 | + | 738 | WP_015059020 | hypothetical protein | - |
| HTM59_RS00460 | 65968..68175 | + | 2208 | WP_021573169 | type IV conjugative transfer system coupling protein TraD | virb4 |