T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 7373..30845
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STM474_RS23650 (STM474_p1005) | 6739..6966 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| STM474_RS23655 (STM474_p1006) | 6966..7364 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| STM474_RS23660 (STM474_p1007) | 7373..9535 | - | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| STM474_RS23665 (STM474_p1008) | 9912..10643 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| STM474_RS23670 (STM474_p1009) | 10679..11173 | - | 495 | WP_010999946 | entry exclusion protein | - |
| STM474_RS23675 (STM474_p1010) | 11189..14011 | - | 2823 | WP_001007087 | conjugal transfer mating-pair stabilization protein TraG | traG |
| STM474_RS23680 (STM474_p1011) | 14008..15390 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| STM474_RS23685 (STM474_p1012) | 15380..15928 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| STM474_RS23690 (STM474_p1013) | 15915..16208 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| STM474_RS23695 (STM474_p1014) | 16422..17171 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| STM474_RS23700 (STM474_p1015) | 17183..17398 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| STM474_RS23705 (STM474_p1016) | 17409..19235 | - | 1827 | WP_000827529 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| STM474_RS23710 (STM474_p1017) | 19232..19651 | - | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| STM474_RS23715 (STM474_p1018) | 19688..20326 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| STM474_RS23720 (STM474_p1019) | 20311..20619 | - | 309 | WP_010999945 | hypothetical protein | - |
| STM474_RS23725 (STM474_p1020) | 20638..21630 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| STM474_RS23730 (STM474_p1021) | 21627..22259 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| STM474_RS23735 (STM474_p1022) | 22256..22642 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| STM474_RS23740 (STM474_p1023) | 22617..25265 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| STM474_RS23745 (STM474_p1024) | 25281..25544 | - | 264 | WP_001239255 | hypothetical protein | - |
| STM474_RS23750 (STM474_p1025) | 25661..26128 | - | 468 | WP_000549562 | hypothetical protein | - |
| STM474_RS23755 (STM474_p1026) | 26121..26342 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| STM474_RS23760 (STM474_p1027) | 26477..26992 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| STM474_RS23765 (STM474_p1028) | 26989..27234 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| STM474_RS23770 (STM474_p1029) | 27212..27808 | - | 597 | WP_000527897 | conjugal transfer pilus-stabilizing protein TraP | - |
| STM474_RS23775 (STM474_p1030) | 27798..29219 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| STM474_RS23780 (STM474_p1031) | 29219..29959 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| STM474_RS23785 (STM474_p1032) | 29946..30512 | - | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| STM474_RS23790 (STM474_p1033) | 30534..30845 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| STM474_RS23795 (STM474_p1034) | 30860..31222 | - | 363 | WP_001273051 | type IV conjugative transfer system pilin TraA | - |
| STM474_RS26265 (STM474_p1035) | 31264..31491 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| STM474_RS23800 (STM474_p1036) | 31585..32271 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| STM474_RS23805 (STM474_p1037) | 32464..32844 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| STM474_RS23810 (STM474_p1038) | 33259..33729 | + | 471 | WP_014344446 | transglycosylase SLT domain-containing protein | - |
| STM474_RS27365 | 34040..34858 | - | 819 | Protein_37 | DUF932 domain-containing protein | - |
| STM474_RS27290 | 34961..35119 | - | 159 | WP_001704449 | hypothetical protein | - |
| STM474_RS27655 | 35205..35333 | - | 129 | WP_000372429 | hypothetical protein | - |