T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38592..57431
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PR011_RS00230 (GPAHCPHI_00044) | 34564..34998 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| PR011_RS00235 (GPAHCPHI_00045) | 34995..35714 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| PR011_RS00240 | 35936..36085 | + | 150 | Protein_48 | plasmid maintenance protein Mok | - |
| PR011_RS00245 | 36027..36152 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| PR011_RS00250 (GPAHCPHI_00047) | 36471..36767 | - | 297 | Protein_50 | hypothetical protein | - |
| PR011_RS00255 (GPAHCPHI_00049) | 37067..37363 | + | 297 | WP_001272251 | hypothetical protein | - |
| PR011_RS00260 (GPAHCPHI_00050) | 37474..38295 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| PR011_RS00265 (GPAHCPHI_00051) | 38592..39239 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| PR011_RS00270 (GPAHCPHI_00052) | 39516..39899 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| PR011_RS00275 (GPAHCPHI_00053) | 40090..40776 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| PR011_RS00280 (GPAHCPHI_00054) | 40870..41097 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| PR011_RS00285 (GPAHCPHI_00055) | 41131..41496 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| PR011_RS00290 (GPAHCPHI_00056) | 41511..41822 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| PR011_RS00295 (GPAHCPHI_00057) | 41844..42410 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| PR011_RS00300 (GPAHCPHI_00058) | 42397..43125 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| PR011_RS00305 (GPAHCPHI_00059) | 43125..44552 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| PR011_RS00310 (GPAHCPHI_00060) | 44542..45132 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| PR011_RS00315 (GPAHCPHI_00061) | 45119..45316 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| PR011_RS00320 (GPAHCPHI_00062) | 45328..45579 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| PR011_RS00325 (GPAHCPHI_00063) | 45576..46091 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| PR011_RS00330 (GPAHCPHI_00064) | 46226..46447 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| PR011_RS00335 (GPAHCPHI_00065) | 46607..49234 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| PR011_RS00340 (GPAHCPHI_00066) | 49231..49617 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| PR011_RS00345 (GPAHCPHI_00067) | 49614..50246 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| PR011_RS00350 (GPAHCPHI_00068) | 50243..51235 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| PR011_RS00355 (GPAHCPHI_00069) | 51262..51570 | + | 309 | WP_000412447 | hypothetical protein | - |
| PR011_RS00360 (GPAHCPHI_00070) | 51633..52154 | + | 522 | WP_015059014 | hypothetical protein | - |
| PR011_RS00365 (GPAHCPHI_00071) | 52181..52819 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| PR011_RS00370 (GPAHCPHI_00072) | 52816..53187 | + | 372 | WP_000056336 | hypothetical protein | - |
| PR011_RS00375 (GPAHCPHI_00073) | 53213..53635 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| PR011_RS00380 (GPAHCPHI_00074) | 53632..55482 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| PR011_RS00385 (GPAHCPHI_00075) | 55509..55766 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| PR011_RS00390 (GPAHCPHI_00076) | 55753..56502 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| PR011_RS00395 (GPAHCPHI_00077) | 56663..56899 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| PR011_RS00400 (GPAHCPHI_00078) | 56886..57431 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| PR011_RS00405 (GPAHCPHI_00079) | 57421..57735 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| PR011_RS00410 (GPAHCPHI_00080) | 57689..58081 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| PR011_RS00415 (GPAHCPHI_00081) | 58068..58874 | + | 807 | Protein_83 | conjugal transfer protein TraH | - |
| PR011_RS00420 (GPAHCPHI_00082) | 58927..59631 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PR011_RS00425 (GPAHCPHI_00083) | 60100..60663 | - | 564 | WP_155082050 | hypothetical protein | - |
| PR011_RS00430 | 60785..61327 | - | 543 | WP_077273850 | restriction endonuclease | - |
| PR011_RS00435 (GPAHCPHI_00085) | 61309..62289 | - | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |