T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 58305..96720
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTR38_RS00325 (pEC006_00060) | 55130..55948 | + | 819 | WP_000106196 | DUF2971 domain-containing protein | - |
| HTR38_RS00330 (pEC006_00061) | 56021..58312 | - | 2292 | WP_001289272 | F-type conjugative transfer protein TrbC | - |
| HTR38_RS00335 (pEC006_00062) | 58305..59375 | - | 1071 | WP_001535705 | IncI1-type conjugal transfer protein TrbB | trbB |
| HTR38_RS00340 (pEC006_00063) | 59394..60602 | - | 1209 | WP_001535704 | IncI1-type conjugal transfer protein TrbA | trbA |
| HTR38_RS00345 (pEC006_00064) | 60894..61046 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| HTR38_RS00350 (pEC006_00065) | 61118..61369 | - | 252 | WP_001535703 | hypothetical protein | - |
| HTR38_RS00610 | 61870..61965 | + | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| HTR38_RS00360 (pEC006_00067) | 62030..62314 | - | 285 | WP_024129996 | hypothetical protein | - |
| HTR38_RS00365 (pEC006_00068) | 62415..62624 | - | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| HTR38_RS00370 (pEC006_00069) | 62722..63336 | - | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HTR38_RS00375 (pEC006_00070) | 63412..65580 | - | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| HTR38_RS00380 (pEC006_00071) | 65677..66261 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| HTR38_RS00385 (pEC006_00072) | 66290..67492 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| HTR38_RS00390 (pEC006_00073) | 67459..68073 | - | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| HTR38_RS00395 (pEC006_00074) | 68073..71117 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| HTR38_RS00400 (pEC006_00075) | 71207..72007 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HTR38_RS00405 (pEC006_00076) | 71991..72179 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HTR38_RS00410 (pEC006_00077) | 72243..72647 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| HTR38_RS00415 (pEC006_00078) | 72698..73225 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HTR38_RS00420 (pEC006_00079) | 73225..73929 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HTR38_RS00425 (pEC006_00080) | 73929..75218 | - | 1290 | WP_001535701 | conjugal transfer protein TraO | traO |
| HTR38_RS00430 (pEC006_00081) | 75221..76204 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| HTR38_RS00435 (pEC006_00082) | 76215..76907 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| HTR38_RS00440 (pEC006_00083) | 76904..77251 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HTR38_RS00445 (pEC006_00084) | 77269..81036 | - | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| HTR38_RS00450 (pEC006_00085) | 81126..81677 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| HTR38_RS00455 (pEC006_00086) | 81692..81982 | - | 291 | WP_001372180 | hypothetical protein | traK |
| HTR38_RS00460 (pEC006_00087) | 81979..83127 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HTR38_RS00465 (pEC006_00088) | 83124..83681 | - | 558 | Protein_90 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HTR38_RS00470 (pEC006_00089) | 83697..84905 | - | 1209 | WP_001352368 | IS4-like element ISVsa5 family transposase | - |
| HTR38_RS00475 (pEC006_00090) | 85011..85280 | - | 270 | Protein_92 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HTR38_RS00480 (pEC006_00091) | 85277..85735 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HTR38_RS00485 (pEC006_00092) | 86130..86714 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| HTR38_RS00490 (pEC006_00093) | 86774..87976 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| HTR38_RS00495 (pEC006_00094) | 88061..88885 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| HTR38_RS00500 (pEC006_00095) | 89036..90190 | - | 1155 | WP_001139957 | site-specific integrase | - |
| HTR38_RS00605 | 90189..90542 | + | 354 | WP_001393368 | hypothetical protein | - |
| HTR38_RS00620 | 90572..90793 | + | 222 | Protein_99 | prepilin | - |
| HTR38_RS00520 (pEC006_00097) | 90790..92214 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTR38_RS00525 (pEC006_00098) | 92214..92870 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HTR38_RS00530 (pEC006_00099) | 92855..93415 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HTR38_RS00535 (pEC006_00100) | 93425..94039 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HTR38_RS00540 (pEC006_00101) | 94057..95154 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HTR38_RS00545 (pEC006_00102) | 95167..96720 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTR38_RS00550 (pEC006_00103) | 96731..97183 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HTR38_RS00555 (pEC006_00104) | 97170..98465 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HTR38_RS00560 (pEC006_00105) | 98458..100140 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HTR38_RS00565 (pEC006_00106) | 100154..100591 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HTR38_RS00570 (pEC006_00107) | 100591..101658 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |