T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47484..58161
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ALIDE_RS22745 (Alide_4467) | 43016..43678 | - | 663 | WP_013521175 | peroxiredoxin-like family protein | - |
| ALIDE_RS22750 (Alide_4468) | 44017..44298 | - | 282 | WP_013521176 | type II toxin-antitoxin system YafQ family toxin | - |
| ALIDE_RS22755 (Alide_4469) | 44285..44551 | - | 267 | WP_013521177 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| ALIDE_RS22760 (Alide_4470) | 45090..46310 | - | 1221 | WP_011114072 | plasmid replication initiator TrfA | - |
| ALIDE_RS22765 (Alide_4471) | 46357..46698 | - | 342 | WP_000019167 | single-stranded DNA-binding protein | - |
| ALIDE_RS22770 (Alide_4472) | 46812..47174 | + | 363 | WP_011137961 | transcriptional regulator | - |
| ALIDE_RS22775 (Alide_4473) | 47484..48446 | + | 963 | WP_011137962 | P-type conjugative transfer ATPase TrbB | virB11 |
| ALIDE_RS22780 (Alide_4474) | 48463..48927 | + | 465 | WP_011114046 | conjugal transfer system pilin TrbC | virB2 |
| ALIDE_RS22785 (Alide_4475) | 48931..49242 | + | 312 | WP_001207961 | conjugal transfer protein TrbD | virB3 |
| ALIDE_RS22790 (Alide_4476) | 49239..51797 | + | 2559 | WP_011114047 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| ALIDE_RS22795 (Alide_4477) | 51794..52576 | + | 783 | WP_006122481 | conjugal transfer protein TrbF | virB8 |
| ALIDE_RS22800 (Alide_4478) | 52594..53493 | + | 900 | WP_013521178 | P-type conjugative transfer protein TrbG | virB9 |
| ALIDE_RS22805 (Alide_4479) | 53496..53984 | + | 489 | WP_006122479 | conjugal transfer protein TrbH | - |
| ALIDE_RS22810 (Alide_4480) | 53989..55410 | + | 1422 | WP_011114050 | TrbI/VirB10 family protein | virB10 |
| ALIDE_RS22815 (Alide_4481) | 55431..56195 | + | 765 | WP_010890135 | P-type conjugative transfer protein TrbJ | virB5 |
| ALIDE_RS22820 (Alide_4482) | 56205..56432 | + | 228 | WP_000644148 | entry exclusion lipoprotein TrbK | - |
| ALIDE_RS22825 (Alide_4483) | 56443..58161 | + | 1719 | WP_011114051 | P-type conjugative transfer protein TrbL | virB6 |
| ALIDE_RS22830 (Alide_4484) | 58179..58766 | + | 588 | WP_010890138 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| ALIDE_RS22835 (Alide_4485) | 58780..59415 | + | 636 | WP_011114052 | transglycosylase SLT domain-containing protein | - |
| ALIDE_RS22840 (Alide_4486) | 59444..59710 | + | 267 | WP_010890140 | hypothetical protein | - |
| ALIDE_RS22845 (Alide_4487) | 59710..60408 | + | 699 | WP_011114053 | TraX family protein | - |
| ALIDE_RS22850 (Alide_4488) | 60424..60855 | + | 432 | WP_001665065 | OmpA family protein | - |
| ALIDE_RS22855 (Alide_4489) | 61008..61583 | - | 576 | WP_001173919 | recombinase family protein | - |
| ALIDE_RS22860 (Alide_4490) | 61710..61946 | - | 237 | WP_013521179 | type II toxin-antitoxin system YafQ family toxin | - |