T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32544..56001
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTM38_RS00170 | 28033..29157 | - | 1125 | WP_000486716 | site-specific integrase | - |
| HTM38_RS00415 | 29570..29791 | - | 222 | Protein_37 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTM38_RS00180 | 29767..30096 | + | 330 | WP_001141248 | hypothetical protein | - |
| HTM38_RS00185 | 30639..31892 | - | 1254 | WP_010895887 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HTM38_RS00190 | 31905..32540 | - | 636 | WP_000934977 | A24 family peptidase | - |
| HTM38_RS00195 | 32544..33026 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| HTM38_RS00200 | 33092..33649 | - | 558 | WP_000095048 | type 4 pilus major pilin | - |
| HTM38_RS00205 | 33694..34803 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| HTM38_RS00210 | 34794..36332 | - | 1539 | WP_172690488 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTM38_RS00215 | 36357..36851 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| HTM38_RS00220 | 36835..38157 | - | 1323 | WP_000454142 | type 4b pilus protein PilO2 | - |
| HTM38_RS00225 | 38196..39839 | - | 1644 | WP_001035592 | PilN family type IVB pilus formation outer membrane protein | - |
| HTM38_RS00230 | 39832..40368 | - | 537 | WP_001220543 | sigma 54-interacting transcriptional regulator | virb4 |
| HTM38_RS00235 | 40415..42373 | - | 1959 | WP_015059539 | type IV secretory system conjugative DNA transfer family protein | - |
| HTM38_RS00240 | 42389..43444 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| HTM38_RS00245 | 43463..44602 | - | 1140 | WP_000790640 | TrbI/VirB10 family protein | virB10 |
| HTM38_RS00250 | 44592..45293 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| HTM38_RS00255 | 45359..46093 | - | 735 | WP_000432282 | type IV secretion system protein | virB8 |
| HTM38_RS00260 | 46259..48616 | - | 2358 | WP_063078682 | VirB4 family type IV secretion system protein | virb4 |
| HTM38_RS00265 | 48622..48942 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| HTM38_RS00400 | 49013..49303 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| HTM38_RS00275 | 49303..49887 | - | 585 | WP_001177113 | lytic transglycosylase domain-containing protein | virB1 |
| HTM38_RS00280 | 49908..50306 | - | 399 | WP_001153665 | hypothetical protein | - |
| HTM38_RS00285 | 50425..50862 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| HTM38_RS00290 | 50868..52103 | - | 1236 | WP_015059538 | TcpQ domain-containing protein | - |
| HTM38_RS00295 | 52106..52405 | - | 300 | WP_000835764 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTM38_RS00300 | 52473..52754 | - | 282 | WP_000638823 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HTM38_RS00305 | 52744..52995 | - | 252 | WP_000121741 | hypothetical protein | - |
| HTM38_RS00310 | 53095..53730 | - | 636 | WP_015059536 | hypothetical protein | - |
| HTM38_RS00315 | 53803..54090 | - | 288 | WP_001032611 | EexN family lipoprotein | - |
| HTM38_RS00320 | 54103..54357 | - | 255 | WP_001043555 | EexN family lipoprotein | - |
| HTM38_RS00325 | 54359..55000 | - | 642 | WP_001425343 | type IV secretion system protein | - |
| HTM38_RS00330 | 55006..56001 | - | 996 | WP_001028543 | type IV secretion system protein | virB6 |
| HTM38_RS00335 | 56005..56262 | - | 258 | WP_000739144 | hypothetical protein | - |
| HTM38_RS00340 | 56259..56612 | - | 354 | WP_223286767 | hypothetical protein | - |
| HTM38_RS00345 | 56832..57278 | - | 447 | WP_001243165 | hypothetical protein | - |
| HTM38_RS00350 | 57289..57459 | - | 171 | WP_000550720 | hypothetical protein | - |
| HTM38_RS00355 | 57463..57906 | - | 444 | WP_000964330 | NfeD family protein | - |
| HTM38_RS00360 | 58280..59233 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| HTM38_RS00365 | 59260..59436 | - | 177 | WP_000753050 | hypothetical protein | - |
| HTM38_RS00370 | 59429..59644 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| HTM38_RS00375 | 59637..60143 | - | 507 | WP_001326595 | CaiF/GrlA family transcriptional regulator | - |