T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24023..44132
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PF584_RS00120 (PF584_34105) | 20174..20878 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| PF584_RS00125 (PF584_34110) | 20884..22197 | + | 1314 | WP_073520341 | HAMP domain-containing methyl-accepting chemotaxis protein | - |
| PF584_RS00130 (PF584_34115) | 22591..22824 | - | 234 | WP_001191790 | hypothetical protein | - |
| PF584_RS00135 (PF584_34120) | 22938..23252 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PF584_RS00140 (PF584_34125) | 23249..23593 | - | 345 | WP_001749964 | hypothetical protein | - |
| PF584_RS00145 (PF584_34130) | 23609..23980 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| PF584_RS00150 (PF584_34135) | 24023..24757 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| PF584_RS00155 (PF584_34140) | 24766..25047 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| PF584_RS00160 (PF584_34145) | 25057..25350 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| PF584_RS00165 (PF584_34150) | 25400..25717 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| PF584_RS00170 (PF584_34155) | 25717..28317 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| PF584_RS00175 (PF584_34160) | 28335..29048 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| PF584_RS00180 (PF584_34165) | 29056..29283 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| PF584_RS00185 (PF584_34170) | 29299..30339 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| PF584_RS00190 | 30410..30568 | + | 159 | WP_012561180 | hypothetical protein | - |
| PF584_RS00195 (PF584_34175) | 30558..31256 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| PF584_RS00200 (PF584_34180) | 31267..32151 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| PF584_RS00205 (PF584_34185) | 32151..33311 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| PF584_RS00210 (PF584_34190) | 33353..34348 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| PF584_RS00215 (PF584_34195) | 34348..34881 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| PF584_RS00220 (PF584_34200) | 35055..35240 | - | 186 | WP_315970982 | DUF6710 family protein | - |
| PF584_RS00225 (PF584_34205) | 35445..35768 | - | 324 | WP_226331933 | DUF6710 family protein | - |
| PF584_RS00230 (PF584_34210) | 36079..36321 | + | 243 | WP_000844627 | transposase | - |
| PF584_RS00235 (PF584_34215) | 36353..37003 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| PF584_RS00240 (PF584_34220) | 37109..38308 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| PF584_RS00245 (PF584_34225) | 38340..38993 | - | 654 | Protein_48 | EamA family transporter | - |
| PF584_RS00250 (PF584_34230) | 39188..39361 | - | 174 | WP_001749978 | hypothetical protein | - |
| PF584_RS00255 (PF584_34235) | 39361..42603 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| PF584_RS00260 (PF584_34240) | 42603..44132 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| PF584_RS00265 (PF584_34245) | 44134..44550 | - | 417 | WP_001749975 | hypothetical protein | - |
| PF584_RS00270 (PF584_34250) | 45041..45460 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| PF584_RS00275 (PF584_34255) | 45469..46185 | + | 717 | WP_001749973 | StbB family protein | - |
| PF584_RS00280 (PF584_34260) | 46187..46555 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| PF584_RS00285 (PF584_34265) | 46737..47069 | + | 333 | WP_272487262 | hypothetical protein | - |
| PF584_RS00290 (PF584_34270) | 47180..47500 | - | 321 | WP_001749971 | protein CcgAII | - |
| PF584_RS00295 (PF584_34275) | 47555..47734 | - | 180 | WP_000214483 | protein CcgAI | - |
| PF584_RS00300 (PF584_34280) | 48461..48970 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |