T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 64499..89690
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTM30_RS00445 | 60524..60757 | - | 234 | WP_001191892 | hypothetical protein | - |
| HTM30_RS00450 | 60739..61356 | - | 618 | WP_001249396 | hypothetical protein | - |
| HTM30_RS00455 | 61524..64502 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| HTM30_RS00460 | 64499..66364 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| HTM30_RS00465 | 66375..66959 | + | 585 | WP_000332866 | hypothetical protein | - |
| HTM30_RS00470 | 66916..67545 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| HTM30_RS00475 | 67555..68001 | + | 447 | WP_000122506 | hypothetical protein | - |
| HTM30_RS00480 | 68011..68388 | + | 378 | WP_000869261 | hypothetical protein | - |
| HTM30_RS00485 | 68388..69050 | + | 663 | WP_001231463 | hypothetical protein | - |
| HTM30_RS00490 | 69231..69374 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTM30_RS00495 | 69386..69751 | + | 366 | WP_001052531 | hypothetical protein | - |
| HTM30_RS00500 | 69896..70177 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTM30_RS00505 | 70174..70800 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTM30_RS00510 | 70784..71701 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTM30_RS00515 | 71701..73014 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTM30_RS00520 | 73011..73589 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTM30_RS00525 | 73593..73985 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTM30_RS00530 | 74186..79717 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| HTM30_RS00535 | 79866..80573 | + | 708 | WP_001259347 | DsbC family protein | - |
| HTM30_RS00540 | 80570..83017 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| HTM30_RS00545 | 83032..83349 | + | 318 | WP_000351984 | hypothetical protein | - |
| HTM30_RS00550 | 83346..83876 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| HTM30_RS00555 | 83839..85104 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| HTM30_RS00560 | 85101..85772 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| HTM30_RS00565 | 85772..86776 | + | 1005 | WP_043940352 | TraU family protein | traU |
| HTM30_RS00570 | 86880..89690 | + | 2811 | WP_001909286 | conjugal transfer mating pair stabilization protein TraN | traN |
| HTM30_RS00575 | 89729..90589 | - | 861 | WP_000709517 | hypothetical protein | - |
| HTM30_RS00580 | 90712..91353 | - | 642 | WP_000796664 | hypothetical protein | - |
| HTM30_RS00585 | 91647..91967 | + | 321 | WP_000547566 | hypothetical protein | - |
| HTM30_RS00590 | 92271..92456 | + | 186 | WP_001186917 | hypothetical protein | - |
| HTM30_RS00595 | 92676..93644 | + | 969 | WP_000085162 | AAA family ATPase | - |
| HTM30_RS00600 | 93655..94563 | + | 909 | WP_000739139 | hypothetical protein | - |