T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 82116..91206
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTH28_RS00850 | 77142..77506 | - | 365 | Protein_80 | LuxR family transcriptional regulator | - |
| HTH28_RS00395 (pHS36-NDM_00082) | 77763..78080 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HTH28_RS00400 (pHS36-NDM_00083) | 78077..78610 | - | 534 | WP_001221666 | lipocalin family protein | - |
| HTH28_RS00405 (pHS36-NDM_00084) | 78704..79849 | - | 1146 | WP_015058212 | class C beta-lactamase CMY-6 | - |
| HTH28_RS00410 (pHS36-NDM_00086) | 80173..81435 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HTH28_RS00415 (pHS36-NDM_00087) | 81720..82112 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTH28_RS00420 (pHS36-NDM_00088) | 82116..82694 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTH28_RS00425 (pHS36-NDM_00089) | 82691..84004 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTH28_RS00430 (pHS36-NDM_00090) | 84004..84921 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTH28_RS00435 (pHS36-NDM_00091) | 84905..85531 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTH28_RS00440 (pHS36-NDM_00092) | 85528..85809 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTH28_RS00445 (pHS36-NDM_00094) | 85954..86319 | - | 366 | WP_001052530 | hypothetical protein | - |
| HTH28_RS00450 (pHS36-NDM_00095) | 86331..86474 | - | 144 | WP_001275801 | hypothetical protein | - |
| HTH28_RS00455 (pHS36-NDM_00096) | 86655..87317 | - | 663 | WP_001231464 | hypothetical protein | - |
| HTH28_RS00460 (pHS36-NDM_00097) | 87317..87694 | - | 378 | WP_000869297 | hypothetical protein | - |
| HTH28_RS00465 (pHS36-NDM_00098) | 87704..88150 | - | 447 | WP_000122507 | hypothetical protein | - |
| HTH28_RS00470 (pHS36-NDM_00099) | 88160..88789 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HTH28_RS00475 (pHS36-NDM_00100) | 88746..89330 | - | 585 | WP_000332868 | hypothetical protein | - |
| HTH28_RS00480 (pHS36-NDM_00101) | 89341..91206 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HTH28_RS00485 (pHS36-NDM_00102) | 91203..94175 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| HTH28_RS00490 (pHS36-NDM_00103) | 94343..94960 | + | 618 | WP_001249395 | hypothetical protein | - |
| HTH28_RS00495 (pHS36-NDM_00104) | 94942..95175 | + | 234 | WP_001191890 | hypothetical protein | - |