T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 17191..27516
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS684_RS00075 | 12466..12816 | + | 351 | Protein_14 | WbuC family cupin fold metalloprotein | - |
| HS684_RS00080 (pKC394-011) | 12863..13738 | - | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| HS684_RS00085 (pKC394-012) | 14096..14800 | + | 705 | WP_013188471 | IS6-like element IS26 family transposase | - |
| HS684_RS00090 (pKC394-013) | 14861..15058 | - | 198 | WP_013188474 | hypothetical protein | - |
| HS684_RS00095 (pKC394-014) | 15063..15704 | - | 642 | WP_001694850 | restriction endonuclease | - |
| HS684_RS00100 (pKC394-015) | 15760..15993 | - | 234 | WP_001191790 | hypothetical protein | - |
| HS684_RS00105 (pKC394-016) | 16107..16421 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS684_RS00110 (pKC394-017) | 16384..16761 | - | 378 | WP_000504250 | hypothetical protein | - |
| HS684_RS00115 (pKC394-018) | 16777..17148 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HS684_RS00120 (pKC394-019) | 17191..17925 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| HS684_RS00125 (pKC394-020) | 17934..18215 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HS684_RS00130 (pKC394-021) | 18225..18518 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| HS684_RS00135 (pKC394-022) | 18568..18885 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HS684_RS00140 (pKC394-023) | 18885..21485 | + | 2601 | WP_001200711 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS684_RS00145 (pKC394-024) | 21503..22216 | + | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| HS684_RS00150 (pKC394-025) | 22224..22451 | + | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| HS684_RS00155 (pKC394-026) | 22467..23507 | + | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| HS684_RS00160 (pKC394-027) | 23578..23736 | + | 159 | WP_012561180 | hypothetical protein | - |
| HS684_RS00165 (pKC394-028) | 23726..24424 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HS684_RS00170 (pKC394-029) | 24435..25319 | + | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HS684_RS00175 (pKC394-030) | 25319..26479 | + | 1161 | WP_000101712 | type IV secretion system protein VirB10 | virB10 |
| HS684_RS00180 (pKC394-031) | 26521..27516 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HS684_RS00185 (pKC394-032) | 27516..28049 | + | 534 | WP_000731968 | phospholipase D family protein | - |
| HS684_RS00190 | 28218..29732 | - | 1515 | Protein_37 | Tn3-like element TnAs1 family transposase | - |
| HS684_RS00195 (pKC394-033) | 29798..30502 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HS684_RS00200 (pKC394-034) | 30659..31219 | - | 561 | WP_003124096 | recombinase family protein | - |
| HS684_RS00205 (pKC394-0341) | 31484..32020 | + | 537 | Protein_40 | PAS domain-containing protein | - |