T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42249..72351
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPF53_RS00240 | 42249..44456 | - | 2208 | WP_021547900 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HPF53_RS00245 | 44453..45232 | - | 780 | WP_000199914 | hypothetical protein | - |
| HPF53_RS00250 | 45435..46148 | - | 714 | WP_033550797 | conjugal transfer complement resistance protein TraT | - |
| HPF53_RS00255 | 46197..46694 | - | 498 | WP_000605862 | entry exclusion protein | - |
| HPF53_RS00260 | 46713..49532 | - | 2820 | WP_171265034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HPF53_RS00265 | 49529..50902 | - | 1374 | WP_000944328 | conjugal transfer pilus assembly protein TraH | traH |
| HPF53_RS00270 | 50889..51281 | - | 393 | WP_000659962 | F-type conjugal transfer protein TrbF | - |
| HPF53_RS00275 | 51262..51609 | - | 348 | WP_071571857 | P-type conjugative transfer protein TrbJ | - |
| HPF53_RS00280 | 51539..52084 | - | 546 | WP_000059829 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HPF53_RS00285 | 52071..52355 | - | 285 | WP_001617873 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HPF53_RS00290 | 52482..52802 | - | 321 | WP_001348757 | conjugal transfer protein TrbA | - |
| HPF53_RS00300 | 53702..54682 | - | 981 | WP_000019450 | IS5-like element ISKpn26 family transposase | - |
| HPF53_RS00305 | 54812..55555 | - | 744 | WP_001030401 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HPF53_RS00310 | 55548..55805 | - | 258 | WP_000864347 | conjugal transfer protein TrbE | - |
| HPF53_RS00315 | 55832..57682 | - | 1851 | WP_000821866 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HPF53_RS00320 | 57679..58317 | - | 639 | WP_001080259 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HPF53_RS00325 | 58326..58631 | - | 306 | WP_000224413 | hypothetical protein | - |
| HPF53_RS00330 | 58661..59653 | - | 993 | WP_000830190 | conjugal transfer pilus assembly protein TraU | traU |
| HPF53_RS00335 | 59650..60282 | - | 633 | WP_001203727 | type-F conjugative transfer system protein TraW | traW |
| HPF53_RS00340 | 60279..60665 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HPF53_RS00345 | 60662..63289 | - | 2628 | WP_001064258 | type IV secretion system protein TraC | virb4 |
| HPF53_RS00350 | 63449..63670 | - | 222 | WP_001278694 | conjugal transfer protein TraR | - |
| HPF53_RS00355 | 63805..64320 | - | 516 | WP_000809886 | type IV conjugative transfer system lipoprotein TraV | traV |
| HPF53_RS00360 | 64320..64631 | - | 312 | WP_001057272 | conjugal transfer protein TrbD | - |
| HPF53_RS00365 | 64618..65184 | - | 567 | WP_000896601 | conjugal transfer pilus-stabilizing protein TraP | - |
| HPF53_RS00370 | 65174..66625 | - | 1452 | WP_000146687 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HPF53_RS00375 | 66625..67353 | - | 729 | WP_001230808 | type-F conjugative transfer system secretin TraK | traK |
| HPF53_RS00380 | 67340..67768 | - | 429 | Protein_75 | type IV conjugative transfer system protein TraE | - |
| HPF53_RS00390 | 69029..69175 | - | 147 | Protein_77 | TraE/TraK family type IV conjugative transfer system protein | - |
| HPF53_RS00395 | 69197..69508 | - | 312 | WP_000012107 | type IV conjugative transfer system protein TraL | traL |
| HPF53_RS00400 | 69513..69875 | - | 363 | WP_000338606 | type IV conjugative transfer system pilin TraA | - |
| HPF53_RS00405 | 69909..70136 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| HPF53_RS00410 | 70224..70901 | - | 678 | WP_001348626 | PAS domain-containing protein | - |
| HPF53_RS00415 | 71035..71418 | - | 384 | WP_001151566 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HPF53_RS00420 | 71749..72351 | + | 603 | WP_000243712 | transglycosylase SLT domain-containing protein | virB1 |
| HPF53_RS00425 | 72648..73469 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| HPF53_RS00430 | 73588..73875 | - | 288 | WP_000107535 | hypothetical protein | - |
| HPF53_RS00435 | 73900..74106 | - | 207 | WP_000275859 | hypothetical protein | - |
| HPF53_RS00655 | 74176..74349 | + | 174 | Protein_87 | hypothetical protein | - |
| HPF53_RS00660 | 74347..74577 | - | 231 | WP_001426396 | hypothetical protein | - |
| HPF53_RS00445 | 74667..75092 | + | 426 | WP_000422741 | transposase | - |
| HPF53_RS00450 | 75089..75439 | + | 351 | WP_000624722 | IS66 family insertion sequence element accessory protein TnpB | - |
| HPF53_RS00455 | 75470..77083 | + | 1614 | WP_000080195 | IS66-like element ISEc23 family transposase | - |