T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 32067..61958
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTH56_RS00180 | 27393..27707 | + | 315 | WP_000872086 | hypothetical protein | - |
| HTH56_RS00465 | 27897..28010 | + | 114 | Protein_40 | DUF5431 family protein | - |
| HTH56_RS00185 | 27955..28077 | + | 123 | WP_223412041 | Hok/Gef family protein | - |
| HTH56_RS00190 | 28378..28627 | - | 250 | Protein_42 | hypothetical protein | - |
| HTH56_RS00195 | 28923..29246 | + | 324 | WP_000533253 | hypothetical protein | - |
| HTH56_RS00200 | 29305..29547 | + | 243 | WP_000540588 | hypothetical protein | - |
| HTH56_RS00470 | 29813..30073 | + | 261 | WP_071600428 | hypothetical protein | - |
| HTH56_RS00205 | 30544..30840 | + | 297 | WP_001272251 | hypothetical protein | - |
| HTH56_RS00210 | 30950..31771 | + | 822 | WP_181727871 | DUF932 domain-containing protein | - |
| HTH56_RS00215 | 32067..32669 | - | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | virB1 |
| HTH56_RS00220 | 32992..33375 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTH56_RS00225 | 33569..34240 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HTH56_RS00230 | 34377..34604 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HTH56_RS00235 | 34637..34996 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| HTH56_RS00240 | 35011..35322 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HTH56_RS00245 | 35344..35910 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HTH56_RS00250 | 35897..36625 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| HTH56_RS00255 | 36625..38076 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTH56_RS00260 | 38066..38632 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTH56_RS00265 | 38619..38939 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| HTH56_RS00270 | 38936..39451 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTH56_RS00275 | 39586..39807 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HTH56_RS00280 | 39800..40213 | + | 414 | WP_000549589 | hypothetical protein | - |
| HTH56_RS00285 | 40206..40679 | + | 474 | WP_000549568 | hypothetical protein | - |
| HTH56_RS00290 | 40759..40977 | + | 219 | WP_000556745 | hypothetical protein | - |
| HTH56_RS00295 | 40978..41154 | + | 177 | WP_172693362 | hypothetical protein | - |
| HTH56_RS00300 | 41243..42471 | + | 1229 | WP_088895425 | IS3-like element IS2 family transposase | - |
| HTH56_RS00305 | 42482..42688 | + | 207 | Protein_66 | hypothetical protein | - |
| HTH56_RS00310 | 42814..45444 | + | 2631 | WP_012917677 | type IV secretion system protein TraC | virb4 |
| HTH56_RS00315 | 45441..45827 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HTH56_RS00320 | 45824..46456 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| HTH56_RS00325 | 46453..47445 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HTH56_RS00330 | 47475..47780 | + | 306 | WP_000224416 | hypothetical protein | - |
| HTH56_RS00335 | 47789..48427 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTH56_RS00340 | 48424..50274 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTH56_RS00345 | 50301..50558 | + | 258 | WP_181727872 | conjugal transfer protein TrbE | - |
| HTH56_RS00350 | 50551..51294 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTH56_RS00355 | 51308..51652 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| HTH56_RS00360 | 51771..52055 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTH56_RS00365 | 52042..52587 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTH56_RS00370 | 52517..52864 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| HTH56_RS00375 | 52845..53237 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| HTH56_RS00380 | 53224..54597 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| HTH56_RS00385 | 54594..57416 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTH56_RS00390 | 57432..57917 | + | 486 | WP_000605870 | hypothetical protein | - |
| HTH56_RS00395 | 57966..58697 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| HTH56_RS00400 | 58900..59637 | + | 738 | WP_000199905 | hypothetical protein | - |
| HTH56_RS00405 | 59688..61958 | + | 2271 | WP_000009328 | type IV conjugative transfer system coupling protein TraD | prgC |