T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42666..71239
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTI52_RS00270 | 38296..39965 | - | 1670 | Protein_52 | group II intron reverse transcriptase/maturase | - |
| HTI52_RS00495 | 40539..40751 | - | 213 | Protein_53 | hypothetical protein | - |
| HTI52_RS00500 | 40707..40844 | - | 138 | Protein_54 | hypothetical protein | - |
| HTI52_RS00280 | 41144..41440 | + | 297 | WP_001272251 | hypothetical protein | - |
| HTI52_RS00285 | 41550..42371 | + | 822 | WP_001234437 | DUF932 domain-containing protein | - |
| HTI52_RS00290 | 42666..43268 | - | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | virB1 |
| HTI52_RS00295 | 43591..43974 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTI52_RS00300 | 44168..44839 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HTI52_RS00305 | 44976..45203 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HTI52_RS00310 | 45236..45595 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| HTI52_RS00315 | 45610..45921 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HTI52_RS00320 | 45943..46509 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HTI52_RS00325 | 46496..47224 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| HTI52_RS00330 | 47224..48675 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTI52_RS00335 | 48665..49231 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTI52_RS00340 | 49218..49538 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| HTI52_RS00345 | 49535..50050 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTI52_RS00350 | 50185..50406 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HTI52_RS00355 | 50399..50812 | + | 414 | WP_000549589 | hypothetical protein | - |
| HTI52_RS00360 | 50805..51278 | + | 474 | WP_000549568 | hypothetical protein | - |
| HTI52_RS00365 | 51358..51576 | + | 219 | WP_000556745 | hypothetical protein | - |
| HTI52_RS00370 | 51604..51951 | + | 348 | WP_000836682 | hypothetical protein | - |
| HTI52_RS00375 | 52077..54707 | + | 2631 | WP_012917677 | type IV secretion system protein TraC | virb4 |
| HTI52_RS00380 | 54704..55090 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HTI52_RS00385 | 55087..55719 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| HTI52_RS00390 | 55716..56708 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HTI52_RS00395 | 56738..57043 | + | 306 | WP_000224416 | hypothetical protein | - |
| HTI52_RS00400 | 57052..57690 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTI52_RS00405 | 57687..59537 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTI52_RS00410 | 59564..59821 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| HTI52_RS00415 | 59814..60557 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTI52_RS00420 | 60571..60915 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| HTI52_RS00425 | 61034..61318 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTI52_RS00430 | 61305..61850 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTI52_RS00435 | 61780..62127 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| HTI52_RS00440 | 62108..62500 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| HTI52_RS00445 | 62487..63860 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| HTI52_RS00450 | 63857..66679 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTI52_RS00455 | 66695..67180 | + | 486 | WP_000605870 | hypothetical protein | - |
| HTI52_RS00460 | 67229..67960 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| HTI52_RS00465 | 68163..68900 | + | 738 | WP_000199905 | hypothetical protein | - |
| HTI52_RS00470 | 68951..71239 | + | 2289 | WP_125097878 | type IV conjugative transfer system coupling protein TraD | prgC |