T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 24687..52966
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS583_RS00140 (pKF370p25) | 24687..26858 | - | 2172 | WP_012881121 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HS583_RS00145 (pKF370p26) | 26909..27646 | - | 738 | WP_012881122 | hypothetical protein | - |
| HS583_RS00150 (pKF370p27) | 27849..28580 | - | 732 | WP_012881123 | conjugal transfer complement resistance protein TraT | - |
| HS583_RS00155 (pKF370p28) | 28594..29103 | - | 510 | WP_000628111 | conjugal transfer entry exclusion protein TraS | - |
| HS583_RS00160 (pKF370p29) | 29100..31925 | - | 2826 | WP_012881124 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HS583_RS00165 (pKF370p30) | 31922..33295 | - | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| HS583_RS00170 (pKF370p31) | 33282..33674 | - | 393 | WP_000659962 | F-type conjugal transfer protein TrbF | - |
| HS583_RS00175 (pKF370p32) | 33655..34002 | - | 348 | WP_011666494 | P-type conjugative transfer protein TrbJ | - |
| HS583_RS00180 (pKF370p33) | 33932..34477 | - | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS583_RS00185 (pKF370p34) | 34464..34748 | - | 285 | WP_000624107 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HS583_RS00190 (pKF370p35) | 34829..35164 | + | 336 | WP_000736414 | hypothetical protein | - |
| HS583_RS00195 (pKF370p36) | 35145..35486 | - | 342 | WP_000556795 | conjugal transfer protein TrbA | - |
| HS583_RS00200 (pKF370p37) | 35500..36249 | - | 750 | WP_001336806 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS583_RS00205 (pKF370p38) | 36236..36493 | - | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| HS583_RS00210 (pKF370p39) | 36520..38370 | - | 1851 | WP_012881125 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS583_RS00215 (pKF370p40) | 38367..39005 | - | 639 | WP_012881126 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS583_RS00220 (pKF370p41) | 39014..39319 | - | 306 | WP_000224418 | hypothetical protein | - |
| HS583_RS00225 (pKF370p42) | 39349..40341 | - | 993 | WP_000830849 | conjugal transfer pilus assembly protein TraU | traU |
| HS583_RS00230 (pKF370p43) | 40338..40970 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| HS583_RS00235 (pKF370p44) | 40967..41353 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HS583_RS00240 (pKF370p45) | 41350..43980 | - | 2631 | WP_000069772 | type IV secretion system protein TraC | virb4 |
| HS583_RS00245 (pKF370p46) | 44106..44453 | - | 348 | WP_000836682 | hypothetical protein | - |
| HS583_RS00250 (pKF370p47) | 44481..44699 | - | 219 | WP_000556745 | hypothetical protein | - |
| HS583_RS00255 (pKF370p48) | 44798..45274 | - | 477 | WP_012881127 | hypothetical protein | - |
| HS583_RS00260 (pKF370p49) | 45267..45488 | - | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HS583_RS00265 (pKF370p50) | 45623..46138 | - | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS583_RS00270 (pKF370p51) | 46135..46455 | - | 321 | WP_012881128 | conjugal transfer protein TrbD | - |
| HS583_RS00275 (pKF370p52) | 46442..47032 | - | 591 | WP_012881129 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS583_RS00280 (pKF370p53) | 47022..48449 | - | 1428 | WP_012881130 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS583_RS00285 (pKF370p54) | 48449..49177 | - | 729 | WP_001230769 | type-F conjugative transfer system secretin TraK | traK |
| HS583_RS00290 (pKF370p55) | 49164..49730 | - | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HS583_RS00295 (pKF370p56) | 49752..50063 | - | 312 | WP_000012100 | type IV conjugative transfer system protein TraL | traL |
| HS583_RS00300 (pKF370p57) | 50078..50440 | - | 363 | WP_012881131 | type IV conjugative transfer system pilin TraA | - |
| HS583_RS00305 (pKF370p58) | 50474..50701 | - | 228 | WP_000589556 | conjugal transfer relaxosome protein TraY | - |
| HS583_RS00310 (pKF370p59) | 50821..51468 | - | 648 | WP_000332523 | transcriptional regulator TraJ family protein | - |
| HS583_RS00315 (pKF370p60) | 51660..52043 | - | 384 | WP_001151529 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS583_RS00320 (pKF370p61) | 52364..52966 | + | 603 | WP_000243715 | transglycosylase SLT domain-containing protein | - |
| HS583_RS00325 (pKF370p63) | 53262..54083 | - | 822 | WP_001234437 | DUF932 domain-containing protein | - |
| HS583_RS00330 (pKF370p64) | 54193..54489 | - | 297 | WP_001272251 | hypothetical protein | - |
| HS583_RS00440 | 54960..55226 | - | 267 | WP_071828223 | hypothetical protein | - |
| HS583_RS00335 (pKF370p68) | 55492..55734 | - | 243 | WP_000540588 | hypothetical protein | - |
| HS583_RS00340 (pKF370p69) | 55793..56116 | - | 324 | WP_000533253 | hypothetical protein | - |
| HS583_RS00345 | 56412..56661 | + | 250 | Protein_70 | hypothetical protein | - |
| HS583_RS00350 (pKF370p72) | 56962..57084 | - | 123 | WP_223412041 | Hok/Gef family protein | - |
| HS583_RS00445 | 57029..57181 | - | 153 | Protein_72 | DUF5431 family protein | - |
| HS583_RS00355 (pKF370p73) | 57332..57646 | - | 315 | WP_000872086 | hypothetical protein | - |