T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 79914..106270
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXF88_RS00455 (pSLTBT_p078) | 75070..77067 | + | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |
| HXF88_RS00460 (pSLTBT_p079) | 77107..77541 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| HXF88_RS00465 (pSLTBT_p080) | 77538..78275 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| HXF88_RS00470 | 78512..78682 | + | 171 | WP_000229547 | hypothetical protein | - |
| HXF88_RS00475 | 78785..79603 | + | 819 | Protein_94 | DUF945 domain-containing protein | - |
| HXF88_RS00480 (pSLTBT_p081) | 79914..80384 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| HXF88_RS00485 (pSLTBT_p082) | 80799..81179 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HXF88_RS00490 (pSLTBT_p083) | 81372..82058 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
| HXF88_RS00495 (pSLTBT_p084) | 82152..82379 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| HXF88_RS00500 (pSLTBT_p085) | 82421..82783 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| HXF88_RS00505 (pSLTBT_p086) | 82798..83109 | + | 312 | WP_012825259 | type IV conjugative transfer system protein TraL | traL |
| HXF88_RS00510 (pSLTBT_p087) | 83131..83697 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| HXF88_RS00515 (pSLTBT_p088) | 83684..84424 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| HXF88_RS00520 (pSLTBT_p089) | 84424..85845 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HXF88_RS00525 (pSLTBT_p090) | 85835..86431 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| HXF88_RS00530 (pSLTBT_p091) | 86409..86654 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| HXF88_RS00535 (pSLTBT_p092) | 86651..87166 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| HXF88_RS00540 (pSLTBT_p093) | 87301..87522 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| HXF88_RS00545 (pSLTBT_p094) | 87515..87982 | + | 468 | WP_000549562 | hypothetical protein | - |
| HXF88_RS00550 (pSLTBT_p095) | 88099..88362 | + | 264 | WP_001239255 | hypothetical protein | - |
| HXF88_RS00555 (pSLTBT_p096) | 88378..91026 | + | 2649 | WP_012825260 | type IV secretion system protein TraC | virb4 |
| HXF88_RS00560 (pSLTBT_p097) | 91001..91387 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| HXF88_RS00565 (pSLTBT_p098) | 91384..92016 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| HXF88_RS00570 (pSLTBT_p099) | 92013..93005 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| HXF88_RS00575 (pSLTBT_p100) | 93024..93332 | + | 309 | WP_010999945 | hypothetical protein | - |
| HXF88_RS00580 (pSLTBT_p101) | 93317..93955 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HXF88_RS00585 (pSLTBT_p102) | 93992..94411 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| HXF88_RS00590 (pSLTBT_p103) | 94408..96234 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HXF88_RS00595 (pSLTBT_p104) | 96245..96460 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| HXF88_RS00600 (pSLTBT_p105) | 96472..97221 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HXF88_RS00605 (pSLTBT_p106) | 97435..97728 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HXF88_RS00610 (pSLTBT_p107) | 97715..98263 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HXF88_RS00615 (pSLTBT_p108) | 98253..99635 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| HXF88_RS00620 (pSLTBT_p109) | 99632..102454 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HXF88_RS00625 (pSLTBT_p110) | 102470..102964 | + | 495 | WP_010999946 | entry exclusion protein | - |
| HXF88_RS00630 (pSLTBT_p111) | 103000..103731 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| HXF88_RS00635 (pSLTBT_p112) | 104108..106270 | + | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HXF88_RS00640 | 106279..106677 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| HXF88_RS00645 | 106677..106904 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |