T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49378..58468
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTF28_RS00350 | 45409..45642 | - | 234 | WP_001191890 | hypothetical protein | - |
| HTF28_RS00355 | 45624..46241 | - | 618 | WP_001249395 | hypothetical protein | - |
| HTF28_RS00360 | 46409..49381 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HTF28_RS00365 | 49378..51243 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HTF28_RS00370 | 51254..51838 | + | 585 | WP_000332868 | hypothetical protein | - |
| HTF28_RS00375 | 51795..52424 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HTF28_RS00380 | 52434..52880 | + | 447 | WP_000122507 | hypothetical protein | - |
| HTF28_RS00385 | 52890..53267 | + | 378 | WP_000869297 | hypothetical protein | - |
| HTF28_RS00390 | 53267..53929 | + | 663 | WP_001231464 | hypothetical protein | - |
| HTF28_RS00395 | 54110..54253 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTF28_RS00400 | 54265..54630 | + | 366 | WP_001052530 | hypothetical protein | - |
| HTF28_RS00405 | 54775..55056 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTF28_RS00410 | 55053..55679 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTF28_RS00415 | 55663..56580 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTF28_RS00420 | 56580..57893 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTF28_RS00425 | 57890..58468 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTF28_RS00430 | 58472..58864 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTF28_RS00435 | 59149..60411 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HTF28_RS00440 | 60735..61880 | + | 1146 | WP_015056382 | class C beta-lactamase CMY-4 | - |
| HTF28_RS00445 | 61974..62507 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HTF28_RS00450 | 62504..62821 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HTF28_RS00455 | 63078..63443 | + | 366 | Protein_92 | LuxR family transcriptional regulator | - |