T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 77911..106908
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC38_RS00435 | 73013..73363 | + | 351 | WP_004153414 | hypothetical protein | - |
| HTC38_RS00440 (D647_p43064) | 73993..74346 | + | 354 | WP_004152748 | hypothetical protein | - |
| HTC38_RS00445 (D647_p43065) | 74403..74750 | + | 348 | WP_004152749 | hypothetical protein | - |
| HTC38_RS00450 | 74845..74991 | + | 147 | WP_004152750 | hypothetical protein | - |
| HTC38_RS00455 (D647_p43066) | 75042..75875 | + | 834 | WP_004152751 | N-6 DNA methylase | - |
| HTC38_RS00460 (D647_p43067) | 76695..77516 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| HTC38_RS00465 (D647_p43068) | 77549..77878 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| HTC38_RS00470 (D647_p43069) | 77911..78396 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| HTC38_RS00475 (D647_p43070) | 78818..79216 | + | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTC38_RS00480 (D647_p43071) | 79390..80076 | + | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| HTC38_RS00485 (D647_p43072) | 80155..80541 | + | 387 | WP_004152495 | TraY domain-containing protein | - |
| HTC38_RS00490 (D647_p43073) | 80595..80963 | + | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| HTC38_RS00495 (D647_p43074) | 80977..81282 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| HTC38_RS00500 (D647_p43075) | 81302..81868 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| HTC38_RS00505 (D647_p43076) | 81855..82595 | + | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| HTC38_RS00510 (D647_p43077) | 82595..84019 | + | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTC38_RS00515 (D647_p43078) | 84133..84717 | + | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTC38_RS00520 (D647_p43079) | 84849..85259 | + | 411 | WP_004152499 | hypothetical protein | - |
| HTC38_RS00525 (D647_p43080) | 85365..85583 | + | 219 | WP_004152501 | hypothetical protein | - |
| HTC38_RS00530 (D647_p43081) | 85584..85895 | + | 312 | WP_004152502 | hypothetical protein | - |
| HTC38_RS00535 (D647_p43082) | 85962..86366 | + | 405 | WP_004152503 | hypothetical protein | - |
| HTC38_RS00540 (D647_p43083) | 86409..86798 | + | 390 | WP_004153076 | hypothetical protein | - |
| HTC38_RS00545 (D647_p43084) | 86806..87204 | + | 399 | WP_011977783 | hypothetical protein | - |
| HTC38_RS00550 (D647_p43085) | 87276..89915 | + | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| HTC38_RS00555 (D647_p43086) | 89915..90304 | + | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| HTC38_RS00560 (D647_p43087) | 90304..90930 | + | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| HTC38_RS00565 (D647_p43088) | 90972..91361 | + | 390 | WP_004152508 | hypothetical protein | - |
| HTC38_RS00570 (D647_p43089) | 91358..92347 | + | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| HTC38_RS00575 (D647_p43090) | 92360..92998 | + | 639 | WP_004152672 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTC38_RS00580 (D647_p43091) | 93057..95012 | + | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTC38_RS00585 (D647_p43092) | 95044..95298 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| HTC38_RS00590 (D647_p43093) | 95276..95524 | + | 249 | WP_004152675 | hypothetical protein | - |
| HTC38_RS00595 (D647_p43094) | 95537..95863 | + | 327 | WP_004152676 | hypothetical protein | - |
| HTC38_RS00600 (D647_p43095) | 95884..96636 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTC38_RS00605 (D647_p43096) | 96647..96886 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTC38_RS00610 (D647_p43097) | 96858..97415 | + | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTC38_RS00615 (D647_p43098) | 97461..97904 | + | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| HTC38_RS00620 (D647_p43099) | 97882..99261 | + | 1380 | WP_004165169 | conjugal transfer pilus assembly protein TraH | traH |
| HTC38_RS00625 (D647_p43100) | 99261..102110 | + | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTC38_RS00630 (D647_p43101) | 102123..102671 | + | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| HTC38_RS00635 (D647_p43102) | 102855..103586 | + | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| HTC38_RS00640 | 103778..104467 | + | 690 | WP_004198206 | hypothetical protein | - |
| HTC38_RS00645 (D647_p43104) | 104596..106908 | + | 2313 | WP_004152620 | type IV conjugative transfer system coupling protein TraD | virb4 |