T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 121052..147186
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO2_RS27295 (APECO2_28395) | 120418..120645 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| APECO2_RS27300 (APECO2_28400) | 120645..121043 | + | 399 | WP_000911333 | tRNA(fMet)-specific endonuclease VapC | - |
| APECO2_RS27305 (APECO2_28405) | 121052..123205 | - | 2154 | WP_039025869 | type IV conjugative transfer system coupling protein TraD | virb4 |
| APECO2_RS27310 (APECO2_28410) | 123458..124189 | - | 732 | WP_000850416 | conjugal transfer complement resistance protein TraT | - |
| APECO2_RS27315 (APECO2_28415) | 124203..124712 | - | 510 | WP_000628105 | conjugal transfer entry exclusion protein TraS | - |
| APECO2_RS27320 (APECO2_28420) | 124709..127534 | - | 2826 | WP_001007036 | conjugal transfer mating-pair stabilization protein TraG | traG |
| APECO2_RS27325 (APECO2_28425) | 127531..128904 | - | 1374 | WP_000944319 | conjugal transfer pilus assembly protein TraH | traH |
| APECO2_RS28710 | 128891..129283 | - | 393 | Protein_127 | F-type conjugal transfer protein TrbF | - |
| APECO2_RS27340 (APECO2_28440) | 129270..129611 | - | 342 | WP_001442101 | P-type conjugative transfer protein TrbJ | - |
| APECO2_RS27345 (APECO2_28445) | 129541..130086 | - | 546 | WP_000059833 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| APECO2_RS27350 (APECO2_28450) | 130073..130357 | - | 285 | WP_000624108 | type-F conjugative transfer system pilin chaperone TraQ | - |
| APECO2_RS28225 (APECO2_28455) | 130438..130713 | + | 276 | WP_114637675 | toxin ArtA | - |
| APECO2_RS27360 (APECO2_28460) | 130715..131062 | - | 348 | WP_001287907 | conjugal transfer protein TrbA | - |
| APECO2_RS27365 (APECO2_28465) | 131078..131821 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| APECO2_RS27370 (APECO2_28470) | 131814..132071 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| APECO2_RS27375 (APECO2_28475) | 132098..133906 | - | 1809 | WP_000821867 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| APECO2_RS27380 (APECO2_28480) | 133903..134541 | - | 639 | WP_000777703 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| APECO2_RS27385 (APECO2_28485) | 134550..135542 | - | 993 | WP_000830183 | conjugal transfer pilus assembly protein TraU | traU |
| APECO2_RS27390 (APECO2_28490) | 135539..136171 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| APECO2_RS27395 (APECO2_28495) | 136168..136554 | - | 387 | WP_000099688 | type-F conjugative transfer system protein TrbI | - |
| APECO2_RS27400 (APECO2_28500) | 136551..139178 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| APECO2_RS27405 (APECO2_28505) | 139338..139559 | - | 222 | WP_001278690 | conjugal transfer protein TraR | - |
| APECO2_RS27410 (APECO2_28510) | 139694..140209 | - | 516 | WP_000809834 | type IV conjugative transfer system lipoprotein TraV | traV |
| APECO2_RS27415 (APECO2_28515) | 140206..140457 | - | 252 | WP_001038351 | conjugal transfer protein TrbG | - |
| APECO2_RS27420 (APECO2_28520) | 140469..140666 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| APECO2_RS27425 (APECO2_28525) | 140653..141243 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| APECO2_RS27430 (APECO2_28530) | 141233..142660 | - | 1428 | WP_031570446 | F-type conjugal transfer pilus assembly protein TraB | traB |
| APECO2_RS27435 (APECO2_28535) | 142660..143388 | - | 729 | WP_001230796 | type-F conjugative transfer system secretin TraK | traK |
| APECO2_RS27440 (APECO2_28540) | 143375..143941 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| APECO2_RS27445 (APECO2_28545) | 143963..144274 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| APECO2_RS27450 (APECO2_28550) | 144289..144648 | - | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| APECO2_RS27455 (APECO2_28555) | 144682..144909 | - | 228 | WP_001254385 | conjugal transfer relaxosome protein TraY | - |
| APECO2_RS27460 (APECO2_28560) | 145003..145689 | - | 687 | WP_000332490 | PAS domain-containing protein | - |
| APECO2_RS27465 (APECO2_28565) | 145879..146262 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| APECO2_RS27475 (APECO2_28575) | 146584..147186 | + | 603 | WP_023145258 | transglycosylase SLT domain-containing protein | - |
| APECO2_RS27480 (APECO2_28580) | 147482..148303 | - | 822 | WP_157917628 | DUF932 domain-containing protein | - |
| APECO2_RS28715 | 148422..148708 | - | 287 | Protein_156 | hypothetical protein | - |
| APECO2_RS28720 | 148710..149031 | + | 322 | Protein_157 | hypothetical protein | - |
| APECO2_RS27490 (APECO2_28590) | 149332..149454 | - | 123 | WP_223195199 | Hok/Gef family protein | - |
| APECO2_RS28725 | 149399..149551 | - | 153 | Protein_159 | DUF5431 family protein | - |
| APECO2_RS27500 (APECO2_28600) | 149768..150487 | - | 720 | WP_001276275 | plasmid SOS inhibition protein A | - |
| APECO2_RS27505 (APECO2_28605) | 150484..150918 | - | 435 | WP_000845935 | conjugation system SOS inhibitor PsiB | - |
| APECO2_RS27510 (APECO2_28610) | 150973..151554 | - | 582 | Protein_162 | hypothetical protein | - |