T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40146..65317
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTB56_RS00210 | 35243..35566 | + | 324 | WP_008324183 | hypothetical protein | - |
| HTB56_RS00215 | 35628..35987 | + | 360 | WP_015493069 | hypothetical protein | - |
| HTB56_RS00220 | 36614..36988 | + | 375 | WP_008324180 | hypothetical protein | - |
| HTB56_RS00225 | 37039..37329 | + | 291 | WP_225368961 | hypothetical protein | - |
| HTB56_RS00230 | 37376..37720 | + | 345 | WP_032635048 | hypothetical protein | - |
| HTB56_RS00235 | 37806..38069 | + | 264 | WP_008324174 | hypothetical protein | - |
| HTB56_RS00240 | 38112..38942 | + | 831 | WP_008324171 | N-6 DNA methylase | - |
| HTB56_RS00245 | 39569..40099 | + | 531 | WP_008324170 | antirestriction protein | - |
| HTB56_RS00250 | 40146..40622 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | - |
| HTB56_RS00255 | 41054..41446 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTB56_RS00260 | 41635..42324 | + | 690 | WP_008324166 | hypothetical protein | - |
| HTB56_RS00265 | 42411..42635 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| HTB56_RS00270 | 42693..43043 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| HTB56_RS00275 | 43194..43499 | + | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| HTB56_RS00280 | 43514..44080 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| HTB56_RS00285 | 44067..44810 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| HTB56_RS00290 | 44797..46191 | + | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTB56_RS00295 | 46213..46752 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTB56_RS00300 | 46872..47096 | + | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| HTB56_RS00305 | 47100..47285 | + | 186 | WP_008324139 | hypothetical protein | - |
| HTB56_RS00310 | 47269..47670 | + | 402 | WP_016479985 | hypothetical protein | - |
| HTB56_RS00315 | 47660..48226 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTB56_RS00320 | 48219..50849 | + | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| HTB56_RS00325 | 50846..51193 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| HTB56_RS00330 | 51193..51840 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| HTB56_RS00335 | 51843..52829 | + | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| HTB56_RS00340 | 52846..53475 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTB56_RS00345 | 53472..55325 | + | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTB56_RS00350 | 55357..55545 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| HTB56_RS00355 | 55576..56325 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTB56_RS00360 | 56342..56590 | + | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTB56_RS00365 | 56580..57134 | + | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTB56_RS00370 | 57127..57555 | + | 429 | WP_008324122 | hypothetical protein | - |
| HTB56_RS00375 | 57542..58912 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| HTB56_RS00380 | 58912..61734 | + | 2823 | WP_008324119 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTB56_RS00385 | 61780..62187 | + | 408 | WP_233406080 | entry exclusion protein | - |
| HTB56_RS00600 | 62280..62600 | + | 321 | WP_227543090 | tetratricopeptide repeat protein | - |
| HTB56_RS00605 | 62608..62937 | + | 330 | WP_223856629 | hypothetical protein | - |
| HTB56_RS00395 | 63071..65317 | + | 2247 | WP_016479979 | type IV conjugative transfer system coupling protein TraD | virb4 |