T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1271206..1280619
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMB554_RS24525 (SMB554_24400) | 1267166..1268857 | + | 1692 | WP_088896193 | type IV secretion system ATPase VirD4 | - |
| SMB554_RS24530 (SMB554_24405) | 1269263..1269988 | - | 726 | WP_088896194 | response regulator | - |
| SMB554_RS24545 (SMB554_24415) | 1271206..1272246 | - | 1041 | WP_088896195 | P-type DNA transfer ATPase VirB11 | virB11 |
| SMB554_RS24550 (SMB554_24420) | 1272286..1273404 | - | 1119 | WP_088896196 | type IV secretion system protein VirB10 | virB10 |
| SMB554_RS24555 (SMB554_24425) | 1273401..1274282 | - | 882 | WP_088896197 | P-type conjugative transfer protein VirB9 | virB9 |
| SMB554_RS24560 (SMB554_24430) | 1274279..1274992 | - | 714 | WP_088896198 | type IV secretion system protein VirB8 | virB8 |
| SMB554_RS24565 (SMB554_24435) | 1274979..1275146 | - | 168 | WP_088896199 | type IV secretion system lipoprotein VirB7 | - |
| SMB554_RS24570 (SMB554_24440) | 1275179..1276066 | - | 888 | WP_088896200 | type IV secretion system protein | virB6 |
| SMB554_RS24575 (SMB554_24445) | 1276147..1276830 | - | 684 | WP_088896201 | pilin minor subunit VirB5 | traI |
| SMB554_RS24580 (SMB554_24450) | 1276844..1279213 | - | 2370 | WP_088896202 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| SMB554_RS24585 (SMB554_24455) | 1279213..1279539 | - | 327 | WP_003537077 | type IV secretion system protein VirB3 | virB3 |
| SMB554_RS24590 (SMB554_24460) | 1279536..1279898 | - | 363 | WP_014528518 | pilin major subunit VirB2 | virB2 |
| SMB554_RS24595 (SMB554_24465) | 1279912..1280619 | - | 708 | WP_088896203 | type IV secretion system lytic transglycosylase VirB1 | virB1 |
| SMB554_RS24600 | 1281050..1281346 | - | 297 | WP_164834811 | hypothetical protein | - |
| SMB554_RS24610 (SMB554_24475) | 1281629..1282134 | + | 506 | Protein_1241 | type IV secretory system conjugative DNA transfer family protein | - |
| SMB554_RS24615 (SMB554_24480) | 1282227..1283423 | + | 1197 | WP_010969783 | IS256-like element ISRm5 family transposase | - |
| SMB554_RS24625 (SMB554_24490) | 1284691..1285416 | + | 726 | WP_003535579 | class I SAM-dependent methyltransferase | - |