T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 25561..36303
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS578_RS00115 (pEK499_p026) | 21528..21962 | + | 435 | WP_000845901 | conjugation system SOS inhibitor PsiB | - |
| HS578_RS00120 (pEK499_p027) | 21959..22721 | + | 763 | Protein_25 | plasmid SOS inhibition protein A | - |
| HS578_RS00695 | 22900..23049 | + | 150 | Protein_26 | plasmid maintenance protein Mok | - |
| HS578_RS00125 (pEK499_p029) | 22991..23116 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HS578_RS00700 | 23336..23566 | + | 231 | WP_071587244 | hypothetical protein | - |
| HS578_RS00705 | 23564..23737 | - | 174 | Protein_29 | hypothetical protein | - |
| HS578_RS00130 | 24035..24322 | + | 288 | WP_000107537 | hypothetical protein | - |
| HS578_RS00135 (pEK499_p032) | 24443..25264 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| HS578_RS00140 (pEK499_p033) | 25561..26208 | - | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| HS578_RS00145 (pEK499_p034) | 26494..26877 | + | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS578_RS00150 (pEK499_p035) | 27071..27757 | + | 687 | WP_000332487 | PAS domain-containing protein | - |
| HS578_RS00155 (pEK499_p036) | 27851..28078 | + | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| HS578_RS00160 (pEK499_p037) | 28112..28474 | + | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| HS578_RS00165 (pEK499_p038) | 28479..28790 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HS578_RS00170 (pEK499_p039) | 28812..29378 | + | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| HS578_RS00175 (pEK499_p040) | 29365..30093 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HS578_RS00180 (pEK499_p041) | 30093..31520 | + | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS578_RS00185 (pEK499_p042) | 31510..32094 | + | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS578_RS00190 (pEK499_p043) | 32081..32401 | + | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| HS578_RS00195 (pEK499_p044) | 32394..32645 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| HS578_RS00200 (pEK499_p045) | 32642..33157 | + | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS578_RS00205 (pEK499_p046) | 33292..33513 | + | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| HS578_RS00210 (pEK499_p047) | 33673..36303 | + | 2631 | WP_012783967 | type IV secretion system protein TraC | virb4 |
| HS578_RS00215 (pEK499_p048) | 36350..37054 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HS578_RS00220 (pEK499_p049) | 37298..38560 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HS578_RS00225 | 38742..38960 | - | 219 | WP_001143771 | DUF4158 domain-containing protein | - |
| HS578_RS00230 (pEK499_p051) | 39124..39681 | + | 558 | WP_001235713 | recombinase family protein | - |
| HS578_RS00235 (pEK499_p052) | 39864..40676 | + | 813 | WP_172683509 | TEM family class A beta-lactamase | - |