T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46735..71839
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS670_RS00320 | 42775..43008 | - | 234 | WP_001191893 | hypothetical protein | - |
| HS670_RS00325 (pRA1_0058) | 42990..43607 | - | 618 | WP_012766323 | hypothetical protein | - |
| HS670_RS00330 (pRA1_0059) | 43775..46738 | + | 2964 | WP_012766324 | MobH family relaxase | - |
| HS670_RS00335 (pRA1_0060) | 46735..48600 | + | 1866 | WP_012766325 | conjugative transfer system coupling protein TraD | virb4 |
| HS670_RS00340 (pRA1_0061) | 48611..49195 | + | 585 | WP_000332867 | hypothetical protein | - |
| HS670_RS00345 (pRA1_0062) | 49152..49781 | + | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| HS670_RS00350 (pRA1_0063) | 49792..50238 | + | 447 | WP_000122583 | hypothetical protein | - |
| HS670_RS00355 (pRA1_0064) | 50248..50625 | + | 378 | WP_000869260 | hypothetical protein | - |
| HS670_RS00360 (pRA1_0065) | 50625..51287 | + | 663 | WP_000045163 | hypothetical protein | - |
| HS670_RS00365 | 51466..51609 | + | 144 | WP_023356351 | hypothetical protein | - |
| HS670_RS00370 (pRA1_0066) | 51622..51969 | + | 348 | WP_001102160 | hypothetical protein | - |
| HS670_RS00375 (pRA1_0067) | 52112..52393 | + | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| HS670_RS00380 (pRA1_0068) | 52390..53016 | + | 627 | WP_001049718 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HS670_RS00385 (pRA1_0069) | 53000..53917 | + | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| HS670_RS00390 (pRA1_0070) | 53914..55230 | + | 1317 | WP_000595204 | TraB/VirB10 family protein | traB |
| HS670_RS00395 (pRA1_0071) | 55227..55805 | + | 579 | WP_000794193 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS670_RS00400 (pRA1_0072) | 55809..56201 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| HS670_RS00405 (pRA1_0073) | 56402..61888 | + | 5487 | WP_012766328 | Ig-like domain-containing protein | - |
| HS670_RS00410 (pRA1_0074) | 62037..62744 | + | 708 | WP_001259344 | DsbC family protein | - |
| HS670_RS00415 (pRA1_0075) | 62741..65188 | + | 2448 | WP_012766329 | type IV secretion system protein TraC | virb4 |
| HS670_RS00420 (pRA1_0076) | 65203..65520 | + | 318 | WP_000364398 | hypothetical protein | - |
| HS670_RS00425 (pRA1_0077) | 65517..66047 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| HS670_RS00430 (pRA1_0078) | 66010..67278 | + | 1269 | WP_012766330 | TrbC family F-type conjugative pilus assembly protein | traW |
| HS670_RS00435 (pRA1_0079) | 67275..67952 | + | 678 | WP_012766331 | EAL domain-containing protein | - |
| HS670_RS00440 (pRA1_0080) | 67946..68950 | + | 1005 | WP_000911304 | TraU family protein | traU |
| HS670_RS00445 (pRA1_0081) | 69101..71839 | + | 2739 | WP_012766332 | conjugal transfer mating pair stabilization protein TraN | traN |
| HS670_RS00450 (pRA1_0082) | 71878..72738 | - | 861 | WP_012766333 | hypothetical protein | - |
| HS670_RS00455 (pRA1_0083) | 72850..73500 | - | 651 | WP_000796641 | hypothetical protein | - |
| HS670_RS00460 (pRA1_0084) | 73791..74111 | + | 321 | WP_012766334 | hypothetical protein | - |
| HS670_RS00465 (pRA1_0085) | 74422..74607 | + | 186 | WP_001186892 | hypothetical protein | - |
| HS670_RS00470 (pRA1_0086) | 74828..75796 | + | 969 | WP_001553257 | AAA family ATPase | - |
| HS670_RS00475 (pRA1_0087) | 75808..76713 | + | 906 | WP_012766335 | hypothetical protein | - |