T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 25147..37797
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB788_RS30820 (BB788_30525) | 20525..20950 | + | 426 | WP_000422741 | transposase | - |
| BB788_RS30825 (BB788_30530) | 20947..21297 | + | 351 | WP_000624722 | IS66 family insertion sequence element accessory protein TnpB | - |
| BB788_RS30830 (BB788_30535) | 21328..22941 | + | 1614 | WP_000080200 | IS66-like element ISEc23 family transposase | - |
| BB788_RS32750 (BB788_30540) | 23026..23322 | - | 297 | Protein_31 | hypothetical protein | - |
| BB788_RS30850 (BB788_30550) | 23622..23918 | + | 297 | WP_001272251 | hypothetical protein | - |
| BB788_RS30855 (BB788_30555) | 24029..24850 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| BB788_RS30860 (BB788_30560) | 25147..25737 | - | 591 | WP_000252683 | transglycosylase SLT domain-containing protein | virB1 |
| BB788_RS30865 (BB788_30565) | 26072..26455 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| BB788_RS30870 (BB788_30570) | 26649..27320 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| BB788_RS30875 (BB788_30575) | 27457..27684 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| BB788_RS30880 (BB788_30580) | 27717..28076 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| BB788_RS30885 (BB788_30585) | 28091..28402 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| BB788_RS30890 (BB788_30590) | 28424..28990 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| BB788_RS30895 (BB788_30595) | 28977..29705 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| BB788_RS30900 (BB788_30600) | 29705..31156 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| BB788_RS30905 (BB788_30605) | 31146..31712 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| BB788_RS30910 (BB788_30610) | 31699..32019 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| BB788_RS30915 (BB788_30615) | 32016..32531 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| BB788_RS30920 (BB788_30620) | 32666..32887 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| BB788_RS30925 (BB788_30625) | 32880..33356 | + | 477 | WP_000549587 | hypothetical protein | - |
| BB788_RS30930 (BB788_30630) | 33436..33654 | + | 219 | WP_000556745 | hypothetical protein | - |
| BB788_RS30935 (BB788_30635) | 33682..34029 | + | 348 | WP_000836682 | hypothetical protein | - |
| BB788_RS30940 (BB788_30640) | 34155..36785 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| BB788_RS30945 (BB788_30645) | 36782..37168 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| BB788_RS30950 (BB788_30650) | 37165..37797 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| BB788_RS30955 (BB788_30655) | 37794..38699 | + | 906 | Protein_53 | conjugal transfer pilus assembly protein TraU | - |
| BB788_RS30965 (BB788_30665) | 38748..39445 | + | 698 | WP_095033700 | IS1-like element IS1B family transposase | - |
| BB788_RS30970 (BB788_30670) | 39478..40068 | + | 591 | WP_000766807 | DUF2726 domain-containing protein | - |
| BB788_RS30975 (BB788_30675) | 40308..40562 | + | 255 | WP_000083830 | replication regulatory protein RepA | - |
| BB788_RS30985 (BB788_30685) | 40800..40874 | + | 75 | WP_001365705 | RepA leader peptide Tap | - |
| BB788_RS30990 (BB788_30690) | 40867..41724 | + | 858 | WP_000130646 | incFII family plasmid replication initiator RepA | - |