T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1567..30392
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB788_RS29090 (BB788_28855) | 353..1172 | + | 820 | Protein_0 | DUF932 domain-containing protein | - |
| BB788_RS29095 (BB788_28860) | 1205..1534 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| BB788_RS29100 (BB788_28865) | 1567..2052 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| BB788_RS29105 (BB788_28870) | 2484..2876 | + | 393 | WP_073558191 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| BB788_RS29110 (BB788_28875) | 3106..3807 | + | 702 | WP_004194113 | hypothetical protein | - |
| BB788_RS29115 (BB788_28880) | 3893..4093 | + | 201 | WP_004194116 | TraY domain-containing protein | - |
| BB788_RS29120 (BB788_28885) | 4162..4530 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| BB788_RS29125 (BB788_28890) | 4544..4849 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| BB788_RS29130 (BB788_28895) | 4869..5435 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| BB788_RS29135 (BB788_28900) | 5422..6162 | + | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| BB788_RS29140 (BB788_28905) | 6162..7586 | + | 1425 | WP_073558192 | F-type conjugal transfer pilus assembly protein TraB | traB |
| BB788_RS29145 (BB788_28910) | 7700..8284 | + | 585 | WP_009309868 | type IV conjugative transfer system lipoprotein TraV | traV |
| BB788_RS29150 (BB788_28915) | 8416..8826 | + | 411 | WP_009309869 | hypothetical protein | - |
| BB788_RS29155 (BB788_28920) | 8932..9150 | + | 219 | WP_004195468 | hypothetical protein | - |
| BB788_RS29160 (BB788_28925) | 9151..9462 | + | 312 | WP_004195465 | hypothetical protein | - |
| BB788_RS29165 (BB788_28930) | 9529..9933 | + | 405 | WP_004197817 | hypothetical protein | - |
| BB788_RS33090 | 9976..10128 | + | 153 | WP_224518895 | hypothetical protein | - |
| BB788_RS29180 (BB788_28940) | 10309..10707 | + | 399 | WP_023179972 | hypothetical protein | - |
| BB788_RS29185 (BB788_28945) | 10779..13418 | + | 2640 | WP_023284638 | type IV secretion system protein TraC | virb4 |
| BB788_RS29190 (BB788_28950) | 13418..13807 | + | 390 | WP_004197815 | type-F conjugative transfer system protein TrbI | - |
| BB788_RS29195 (BB788_28955) | 13807..14433 | + | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| BB788_RS29200 (BB788_28960) | 14475..14864 | + | 390 | WP_004194992 | hypothetical protein | - |
| BB788_RS29205 (BB788_28965) | 14861..15850 | + | 990 | WP_073558193 | conjugal transfer pilus assembly protein TraU | traU |
| BB788_RS29210 (BB788_28970) | 15863..16501 | + | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| BB788_RS29215 (BB788_28975) | 16560..18515 | + | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| BB788_RS29220 (BB788_28980) | 18547..18801 | + | 255 | WP_073558194 | conjugal transfer protein TrbE | - |
| BB788_RS29225 (BB788_28985) | 18779..19027 | + | 249 | WP_004152675 | hypothetical protein | - |
| BB788_RS29230 (BB788_28990) | 19040..19366 | + | 327 | WP_004152676 | hypothetical protein | - |
| BB788_RS29235 (BB788_28995) | 19387..20139 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| BB788_RS29240 (BB788_29000) | 20150..20389 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BB788_RS29245 (BB788_29005) | 20361..20918 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| BB788_RS29250 (BB788_29010) | 20964..21407 | + | 444 | WP_004194305 | F-type conjugal transfer protein TrbF | - |
| BB788_RS29255 (BB788_29015) | 21385..22764 | + | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| BB788_RS29260 (BB788_29020) | 22764..25616 | + | 2853 | WP_073558195 | conjugal transfer mating-pair stabilization protein TraG | traG |
| BB788_RS29265 (BB788_29025) | 25619..26152 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| BB788_RS29270 (BB788_29030) | 26338..27069 | + | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| BB788_RS32730 | 27262..27951 | + | 690 | WP_072101983 | hypothetical protein | - |
| BB788_RS29280 (BB788_29040) | 28080..30392 | + | 2313 | WP_077272951 | type IV conjugative transfer system coupling protein TraD | virb4 |