T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 83516..111764
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM93_RS27380 (WM93_26260) | 83516..85825 | - | 2310 | WP_065803682 | type IV conjugative transfer system coupling protein TraD | virb4 |
| WM93_RS27385 (WM93_26265) | 86187..86918 | - | 732 | Protein_89 | conjugal transfer complement resistance protein TraT | - |
| WM93_RS27390 (WM93_26270) | 87108..87635 | - | 528 | WP_024623127 | conjugal transfer protein TraS | - |
| WM93_RS27395 (WM93_26275) | 87641..90490 | - | 2850 | WP_015065640 | conjugal transfer mating-pair stabilization protein TraG | traG |
| WM93_RS27400 (WM93_26280) | 90490..91869 | - | 1380 | WP_011977731 | conjugal transfer pilus assembly protein TraH | traH |
| WM93_RS27405 (WM93_26285) | 91847..92290 | - | 444 | WP_015065638 | F-type conjugal transfer protein TrbF | - |
| WM93_RS27410 (WM93_26290) | 92335..92892 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| WM93_RS27415 (WM93_26295) | 92864..93103 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| WM93_RS27420 (WM93_26300) | 93114..93866 | - | 753 | WP_015065637 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| WM93_RS27425 (WM93_26305) | 93887..94213 | - | 327 | WP_004152685 | hypothetical protein | - |
| WM93_RS29575 (WM93_26310) | 94259..94444 | - | 186 | WP_023307535 | hypothetical protein | - |
| WM93_RS27435 (WM93_26315) | 94441..94677 | - | 237 | WP_023307536 | conjugal transfer protein TrbE | - |
| WM93_RS27440 (WM93_26320) | 94709..96664 | - | 1956 | WP_015065636 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| WM93_RS27445 (WM93_26325) | 96723..97361 | - | 639 | WP_015065635 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| WM93_RS27450 (WM93_26330) | 97374..98333 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| WM93_RS27455 (WM93_26335) | 98377..99003 | - | 627 | WP_015065633 | type-F conjugative transfer system protein TraW | traW |
| WM93_RS27460 (WM93_26340) | 99003..99392 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| WM93_RS27465 (WM93_26345) | 99392..102031 | - | 2640 | WP_016528865 | type IV secretion system protein TraC | virb4 |
| WM93_RS27470 (WM93_26350) | 102103..102501 | - | 399 | WP_015065631 | hypothetical protein | - |
| WM93_RS27475 (WM93_26355) | 102526..102930 | - | 405 | WP_023320104 | hypothetical protein | - |
| WM93_RS27480 (WM93_26360) | 102997..103314 | - | 318 | WP_015065629 | hypothetical protein | - |
| WM93_RS27485 (WM93_26365) | 103315..103533 | - | 219 | WP_004171484 | hypothetical protein | - |
| WM93_RS27490 (WM93_26370) | 103557..103847 | - | 291 | WP_032426790 | hypothetical protein | - |
| WM93_RS29420 | 103876..104274 | - | 399 | WP_223177007 | hypothetical protein | - |
| WM93_RS27500 (WM93_26375) | 104430..104999 | - | 570 | WP_015065628 | type IV conjugative transfer system lipoprotein TraV | traV |
| WM93_RS29235 | 105019..105174 | - | 156 | WP_153587559 | hypothetical protein | - |
| WM93_RS27505 (WM93_26380) | 105205..105624 | - | 420 | Protein_114 | conjugal transfer pilus-stabilizing protein TraP | - |
| WM93_RS27510 (WM93_26385) | 105617..107041 | - | 1425 | WP_040228261 | F-type conjugal transfer pilus assembly protein TraB | traB |
| WM93_RS27515 (WM93_26390) | 107041..107781 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| WM93_RS27520 (WM93_26395) | 107768..108334 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| WM93_RS27525 (WM93_26400) | 108354..108659 | - | 306 | WP_015065625 | type IV conjugative transfer system protein TraL | traL |
| WM93_RS27530 (WM93_26405) | 108673..109041 | - | 369 | WP_004178060 | type IV conjugative transfer system pilin TraA | - |
| WM93_RS27535 (WM93_26410) | 109095..109466 | - | 372 | WP_004208838 | TraY domain-containing protein | - |
| WM93_RS27540 | 109550..110245 | - | 696 | WP_015065624 | transcriptional regulator TraJ family protein | - |
| WM93_RS27545 (WM93_26420) | 110452..110844 | - | 393 | WP_004206766 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| WM93_RS27550 (WM93_26425) | 111279..111764 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| WM93_RS28720 | 111797..112111 | - | 315 | WP_001568110 | DUF5983 family protein | - |
| WM93_RS27560 (WM93_26430) | 112159..112980 | - | 822 | WP_015065622 | DUF932 domain-containing protein | - |
| WM93_RS27580 (WM93_26445) | 113814..114227 | - | 414 | WP_004182074 | helix-turn-helix domain-containing protein | - |
| WM93_RS27585 (WM93_26450) | 114228..114506 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| WM93_RS27590 (WM93_26455) | 114496..114816 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| WM93_RS27595 (WM93_26460) | 114897..115121 | - | 225 | WP_004152719 | hypothetical protein | - |
| WM93_RS27600 (WM93_26465) | 115132..115344 | - | 213 | WP_021313197 | hypothetical protein | - |
| WM93_RS27605 (WM93_26470) | 115405..115761 | - | 357 | WP_004152717 | hypothetical protein | - |
| WM93_RS27620 (WM93_26475) | 116397..116747 | - | 351 | WP_015065620 | hypothetical protein | - |