T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53480..82130
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM278_RS29875 (AM278_28545) | 48531..48881 | + | 351 | WP_014386186 | hypothetical protein | - |
| AM278_RS29890 (AM278_28550) | 49518..49844 | + | 327 | WP_014386187 | hypothetical protein | - |
| AM278_RS29895 (AM278_28555) | 49906..50118 | + | 213 | WP_014386188 | hypothetical protein | - |
| AM278_RS29900 (AM278_28560) | 50129..50353 | + | 225 | WP_014386189 | hypothetical protein | - |
| AM278_RS29905 (AM278_28565) | 50434..50754 | + | 321 | WP_014386190 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM278_RS29910 (AM278_28570) | 50744..51022 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| AM278_RS29915 (AM278_28575) | 51023..51436 | + | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| AM278_RS29935 (AM278_28580) | 52269..53089 | + | 821 | Protein_62 | DUF932 domain-containing protein | - |
| AM278_RS32355 | 53122..53448 | + | 327 | Protein_63 | DUF5983 family protein | - |
| AM278_RS29940 (AM278_28585) | 53480..53965 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| AM278_RS29945 (AM278_28590) | 54356..54772 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AM278_RS29950 (AM278_28595) | 54971..55690 | + | 720 | WP_162899473 | conjugal transfer protein TrbJ | - |
| AM278_RS29955 | 55823..56026 | + | 204 | WP_171486139 | TraY domain-containing protein | - |
| AM278_RS29960 (AM278_28600) | 56091..56459 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| AM278_RS29965 (AM278_28605) | 56473..56778 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| AM278_RS29970 (AM278_28610) | 56798..57364 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| AM278_RS29975 (AM278_28615) | 57351..58091 | + | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| AM278_RS29980 (AM278_28620) | 58091..59515 | + | 1425 | WP_032426793 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AM278_RS29985 (AM278_28625) | 59629..60213 | + | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM278_RS29990 (AM278_28630) | 60536..60754 | + | 219 | WP_004195468 | hypothetical protein | - |
| AM278_RS29995 (AM278_28635) | 60755..61066 | + | 312 | WP_013214022 | hypothetical protein | - |
| AM278_RS30000 (AM278_28640) | 61133..61537 | + | 405 | WP_004197817 | hypothetical protein | - |
| AM278_RS30015 (AM278_28645) | 61914..62312 | + | 399 | WP_014343490 | hypothetical protein | - |
| AM278_RS30020 (AM278_28650) | 62384..65023 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| AM278_RS30025 (AM278_28655) | 65023..65412 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| AM278_RS30030 (AM278_28660) | 65412..66047 | + | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| AM278_RS30035 (AM278_28665) | 66082..66483 | + | 402 | WP_004194979 | hypothetical protein | - |
| AM278_RS30040 (AM278_28670) | 66480..67469 | + | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| AM278_RS30045 (AM278_28675) | 67482..68120 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AM278_RS30050 (AM278_28680) | 68179..70134 | + | 1956 | WP_014343489 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AM278_RS30055 (AM278_28685) | 70166..70420 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| AM278_RS30060 (AM278_28690) | 70398..70646 | + | 249 | WP_013214029 | hypothetical protein | - |
| AM278_RS30065 (AM278_28695) | 70659..70985 | + | 327 | WP_013214030 | hypothetical protein | - |
| AM278_RS30070 (AM278_28700) | 71006..71758 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AM278_RS30075 (AM278_28705) | 71769..72008 | + | 240 | WP_032440623 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM278_RS30080 (AM278_28710) | 71980..72537 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AM278_RS30085 (AM278_28715) | 72583..73026 | + | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| AM278_RS30090 (AM278_28720) | 73004..74383 | + | 1380 | WP_072157884 | conjugal transfer pilus assembly protein TraH | traH |
| AM278_RS30095 (AM278_28725) | 74383..77205 | + | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AM278_RS30100 | 77228..77830 | + | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| AM278_RS30105 (AM278_28730) | 78081..78812 | + | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| AM278_RS32060 | 79005..79694 | + | 690 | WP_014343485 | hypothetical protein | - |
| AM278_RS30115 (AM278_28740) | 79821..82130 | + | 2310 | WP_014386205 | type IV conjugative transfer system coupling protein TraD | virb4 |