T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26837..55480
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM278_RS32335 (AM278_27690) | 21878..22039 | + | 162 | Protein_28 | hypothetical protein | - |
| AM278_RS32520 | 21970..22206 | - | 237 | WP_306046130 | hypothetical protein | - |
| AM278_RS28885 (AM278_27695) | 22188..23168 | - | 981 | WP_020806188 | IS5-like element ISKpn26 family transposase | - |
| AM278_RS28890 (AM278_27700) | 23261..23473 | + | 213 | WP_019706020 | hypothetical protein | - |
| AM278_RS28895 (AM278_27705) | 23484..23708 | + | 225 | WP_014343499 | hypothetical protein | - |
| AM278_RS28900 (AM278_27710) | 23789..24109 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AM278_RS28905 (AM278_27715) | 24099..24377 | + | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| AM278_RS28910 (AM278_27720) | 24378..24791 | + | 414 | WP_023287139 | helix-turn-helix domain-containing protein | - |
| AM278_RS28930 (AM278_27730) | 25621..26442 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| AM278_RS28935 | 26475..26804 | + | 330 | WP_053390269 | DUF5983 family protein | - |
| AM278_RS28940 (AM278_27735) | 26837..27322 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| AM278_RS28945 (AM278_27740) | 27713..28129 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AM278_RS28950 (AM278_27745) | 28328..29047 | + | 720 | WP_162899473 | conjugal transfer protein TrbJ | - |
| AM278_RS28955 (AM278_27750) | 29180..29383 | + | 204 | WP_171486139 | TraY domain-containing protein | - |
| AM278_RS28960 (AM278_27755) | 29448..29816 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| AM278_RS28965 (AM278_27760) | 29830..30135 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| AM278_RS28970 (AM278_27765) | 30155..30721 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| AM278_RS28975 (AM278_27770) | 30708..31448 | + | 741 | WP_013214019 | type-F conjugative transfer system secretin TraK | traK |
| AM278_RS28980 (AM278_27775) | 31448..32872 | + | 1425 | WP_032426793 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AM278_RS28985 (AM278_27780) | 32986..33570 | + | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| AM278_RS28990 (AM278_27785) | 33893..34111 | + | 219 | WP_004195468 | hypothetical protein | - |
| AM278_RS28995 (AM278_27790) | 34112..34423 | + | 312 | WP_013214022 | hypothetical protein | - |
| AM278_RS29000 (AM278_27795) | 34490..34894 | + | 405 | WP_004197817 | hypothetical protein | - |
| AM278_RS29015 (AM278_27805) | 35271..35669 | + | 399 | WP_014343490 | hypothetical protein | - |
| AM278_RS29020 (AM278_27810) | 35741..38380 | + | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| AM278_RS29025 (AM278_27815) | 38380..38769 | + | 390 | WP_013214025 | type-F conjugative transfer system protein TrbI | - |
| AM278_RS29030 (AM278_27820) | 38769..39404 | + | 636 | WP_013214026 | type-F conjugative transfer system protein TraW | traW |
| AM278_RS29035 (AM278_27825) | 39439..39840 | + | 402 | WP_004194979 | hypothetical protein | - |
| AM278_RS29040 (AM278_27830) | 39837..40826 | + | 990 | WP_013214027 | conjugal transfer pilus assembly protein TraU | traU |
| AM278_RS29045 (AM278_27835) | 40839..41477 | + | 639 | WP_004193871 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AM278_RS29050 (AM278_27840) | 41536..43491 | + | 1956 | WP_071854293 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AM278_RS29055 | 43523..43777 | + | 255 | WP_023287133 | conjugal transfer protein TrbE | - |
| AM278_RS29060 (AM278_27845) | 43755..44003 | + | 249 | WP_013214029 | hypothetical protein | - |
| AM278_RS29065 (AM278_27850) | 44016..44342 | + | 327 | WP_004152676 | hypothetical protein | - |
| AM278_RS29070 (AM278_27855) | 44363..45115 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AM278_RS29075 (AM278_27860) | 45126..45365 | + | 240 | WP_064146598 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM278_RS29080 (AM278_27865) | 45337..45894 | + | 558 | WP_071854294 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AM278_RS29085 (AM278_27870) | 45940..46383 | + | 444 | WP_023287131 | F-type conjugal transfer protein TrbF | - |
| AM278_RS29090 (AM278_27875) | 46361..47740 | + | 1380 | WP_072159474 | conjugal transfer pilus assembly protein TraH | traH |
| AM278_RS29095 (AM278_27880) | 47740..50583 | + | 2844 | WP_015065537 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AM278_RS29100 (AM278_27885) | 50594..51118 | + | 525 | WP_015065538 | hypothetical protein | - |
| AM278_RS29105 (AM278_27890) | 51427..52158 | + | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| AM278_RS32030 | 52350..53039 | + | 690 | WP_015065540 | hypothetical protein | - |
| AM278_RS29115 (AM278_27900) | 53168..55480 | + | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |