T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 56956..78797
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM278_RS27935 | 52016..52423 | + | 408 | WP_015632445 | transposase | - |
| AM278_RS27940 (AM278_26790) | 52420..52769 | + | 350 | Protein_70 | IS66 family insertion sequence element accessory protein TnpB | - |
| AM278_RS27945 (AM278_26795) | 52799..54388 | + | 1590 | WP_015632444 | IS66 family transposase | - |
| AM278_RS27950 (AM278_26800) | 54411..54716 | - | 306 | WP_015632443 | phospholipase D-like domain-containing protein | - |
| AM278_RS27955 (AM278_26805) | 54762..56954 | - | 2193 | WP_015632442 | F-type conjugative transfer protein TrbC | - |
| AM278_RS27960 | 56956..58047 | - | 1092 | WP_050484136 | thioredoxin fold domain-containing protein | trbB |
| AM278_RS27965 (AM278_26815) | 58058..59476 | - | 1419 | WP_015632440 | hypothetical protein | trbA |
| AM278_RS27970 (AM278_26820) | 59578..60201 | - | 624 | WP_015632439 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM278_RS27975 (AM278_26825) | 60267..62411 | - | 2145 | WP_015632438 | DotA/TraY family protein | traY |
| AM278_RS27980 | 62453..63034 | - | 582 | WP_015632437 | conjugal transfer protein TraX | - |
| AM278_RS27985 (AM278_26835) | 63031..64227 | - | 1197 | WP_015632436 | conjugal transfer protein TraW | traW |
| AM278_RS27990 (AM278_26840) | 64238..67285 | - | 3048 | WP_015632435 | conjugal transfer protein | traU |
| AM278_RS31360 | 67295..67609 | - | 315 | WP_123677146 | hypothetical protein | traT |
| AM278_RS28000 (AM278_26850) | 67902..68303 | - | 402 | WP_015632433 | DUF6750 family protein | traR |
| AM278_RS28005 (AM278_26855) | 68357..68890 | - | 534 | WP_015632432 | conjugal transfer protein TraQ | traQ |
| AM278_RS28010 (AM278_26860) | 68900..69619 | - | 720 | WP_015632431 | conjugal transfer protein TraP | traP |
| AM278_RS28015 (AM278_26865) | 69625..70965 | - | 1341 | WP_015632430 | conjugal transfer protein TraO | traO |
| AM278_RS28020 (AM278_26870) | 70969..72072 | - | 1104 | WP_015632429 | DotH/IcmK family type IV secretion protein | traN |
| AM278_RS28025 (AM278_26875) | 72083..72787 | - | 705 | WP_015632428 | DotI/IcmL/TraM family protein | traM |
| AM278_RS28030 (AM278_26880) | 72823..73176 | - | 354 | WP_015632427 | hypothetical protein | traL |
| AM278_RS32005 | 73210..76533 | - | 3324 | WP_032495745 | LPD7 domain-containing protein | - |
| AM278_RS28040 (AM278_26895) | 76551..76817 | - | 267 | WP_032441926 | IcmT/TraK family protein | traK |
| AM278_RS28045 (AM278_26900) | 76814..78001 | - | 1188 | WP_032495744 | plasmid transfer ATPase TraJ | virB11 |
| AM278_RS28050 (AM278_26905) | 77979..78797 | - | 819 | WP_015632425 | type IV secretory system conjugative DNA transfer family protein | traI |
| AM278_RS28055 (AM278_26910) | 78794..79261 | - | 468 | WP_015632424 | DotD/TraH family lipoprotein | - |
| AM278_RS28060 (AM278_26915) | 79284..79763 | - | 480 | WP_015632423 | lytic transglycosylase domain-containing protein | - |
| AM278_RS28065 (AM278_26920) | 80461..80772 | - | 312 | WP_015632421 | hypothetical protein | - |
| AM278_RS31365 | 80806..81009 | - | 204 | WP_032495743 | hypothetical protein | - |
| AM278_RS28070 (AM278_26925) | 81027..81494 | - | 468 | WP_032495742 | transcription termination/antitermination NusG family protein | - |
| AM278_RS28075 (AM278_26930) | 81828..82406 | + | 579 | WP_015632419 | hypothetical protein | - |
| AM278_RS28080 (AM278_26935) | 82388..82858 | + | 471 | WP_032441927 | hypothetical protein | - |
| AM278_RS28085 (AM278_26940) | 82858..83244 | + | 387 | WP_015632417 | acyl-CoA thioesterase | - |