T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 51066..60156
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS646_RS00360 (pAR060302_0067) | 47097..47330 | - | 234 | WP_001191890 | hypothetical protein | - |
| HS646_RS00365 (pAR060302_0068) | 47312..47929 | - | 618 | WP_001249395 | hypothetical protein | - |
| HS646_RS00370 (pAR060302_0069) | 48097..51069 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HS646_RS00375 (pAR060302_0070) | 51066..52931 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HS646_RS00380 (pAR060302_0071) | 52942..53526 | + | 585 | WP_000332868 | hypothetical protein | - |
| HS646_RS00385 (pAR060302_0072) | 53483..54112 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HS646_RS00390 (pAR060302_0073) | 54122..54568 | + | 447 | WP_000122507 | hypothetical protein | - |
| HS646_RS00395 (pAR060302_0074) | 54578..54955 | + | 378 | WP_000869297 | hypothetical protein | - |
| HS646_RS00400 (pAR060302_0075) | 54955..55617 | + | 663 | WP_001231464 | hypothetical protein | - |
| HS646_RS00405 | 55798..55941 | + | 144 | WP_001275801 | hypothetical protein | - |
| HS646_RS00410 (pAR060302_0076) | 55953..56318 | + | 366 | WP_001052530 | hypothetical protein | - |
| HS646_RS00415 (pAR060302_0077) | 56463..56744 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HS646_RS00420 (pAR060302_0078) | 56741..57367 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HS646_RS00425 (pAR060302_0079) | 57351..58268 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HS646_RS00430 (pAR060302_0080) | 58268..59581 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HS646_RS00435 (pAR060302_0081) | 59578..60156 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS646_RS00440 (pAR060302_0082) | 60160..60552 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HS646_RS00445 (pAR060302_0083) | 60837..62099 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HS646_RS00450 (pAR060302_0084) | 62423..63568 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HS646_RS00455 (pAR060302_0085) | 63662..64195 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HS646_RS00460 (pAR060302_0086) | 64192..64509 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |