T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 198712..208300
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMK00_RS33210 | 195196..195422 | - | 227 | Protein_188 | chaperonin GroEL | - |
| AMK00_RS23515 (AMK00_PB00172) | 195717..196637 | + | 921 | WP_064811974 | zincin-like metallopeptidase domain-containing protein | - |
| AMK00_RS23520 | 196748..196930 | - | 183 | WP_016737443 | hypothetical protein | - |
| AMK00_RS23525 (AMK00_PB00173) | 197702..198073 | - | 372 | WP_042120136 | hypothetical protein | - |
| AMK00_RS23530 (AMK00_PB00174) | 198172..198708 | + | 537 | WP_064811975 | hypothetical protein | - |
| AMK00_RS23535 (AMK00_PB00175) | 198712..199371 | + | 660 | WP_064811976 | lytic transglycosylase domain-containing protein | virB1 |
| AMK00_RS23540 (AMK00_PB00176) | 199368..199667 | + | 300 | WP_009997887 | TrbC/VirB2 family protein | virB2 |
| AMK00_RS23545 (AMK00_PB00177) | 199673..200011 | + | 339 | WP_009997888 | type IV secretion system protein VirB3 | virB3 |
| AMK00_RS23550 (AMK00_PB00178) | 200004..202370 | + | 2367 | WP_064811977 | VirB4 family type IV secretion system protein | virb4 |
| AMK00_RS23555 (AMK00_PB00179) | 202367..203068 | + | 702 | WP_064811978 | P-type DNA transfer protein VirB5 | virB5 |
| AMK00_RS23560 (AMK00_PB00180) | 203065..203298 | + | 234 | WP_010007459 | EexN family lipoprotein | - |
| AMK00_RS23565 (AMK00_PB00181) | 203302..204234 | + | 933 | WP_040111793 | type IV secretion system protein | virB6 |
| AMK00_RS33215 (AMK00_PB00182) | 204274..204555 | + | 282 | WP_080771758 | hypothetical protein | - |
| AMK00_RS23570 (AMK00_PB00183) | 204557..205228 | + | 672 | WP_064811979 | virB8 family protein | virB8 |
| AMK00_RS23575 (AMK00_PB00184) | 205225..206082 | + | 858 | WP_064811980 | P-type conjugative transfer protein VirB9 | virB9 |
| AMK00_RS23580 (AMK00_PB00185) | 206091..207263 | + | 1173 | WP_064811981 | type IV secretion system protein VirB10 | virB10 |
| AMK00_RS23585 (AMK00_PB00186) | 207272..208300 | + | 1029 | WP_010008207 | P-type DNA transfer ATPase VirB11 | virB11 |
| AMK00_RS23590 (AMK00_PB00187) | 208344..208922 | - | 579 | WP_064811982 | PIN domain-containing protein | - |
| AMK00_RS23595 (AMK00_PB00188) | 208912..209358 | - | 447 | WP_225881772 | DNA-binding protein | - |
| AMK00_RS23600 (AMK00_PB00190) | 209870..211060 | - | 1191 | WP_064811984 | DUF1173 domain-containing protein | - |
| AMK00_RS33220 | 211371..211630 | + | 260 | Protein_208 | toprim domain-containing protein | - |
| AMK00_RS23610 (AMK00_PB00191) | 212016..212282 | + | 267 | WP_004676093 | hypothetical protein | - |
| AMK00_RS23615 (AMK00_PB00192) | 212279..212677 | + | 399 | WP_064811986 | type II toxin-antitoxin system VapC family toxin | - |