T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 179254..188852
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMC88_RS34185 | 176029..176255 | - | 227 | Protein_163 | chaperonin GroEL | - |
| AMC88_RS26035 (AMC88_PC00153) | 176550..177470 | + | 921 | WP_004673402 | zincin-like metallopeptidase domain-containing protein | - |
| AMC88_RS26040 (AMC88_PC00154) | 178244..178615 | - | 372 | WP_042120136 | hypothetical protein | - |
| AMC88_RS26045 (AMC88_PC00155) | 178714..179250 | + | 537 | WP_011053366 | hypothetical protein | - |
| AMC88_RS26050 (AMC88_PC00156) | 179254..179922 | + | 669 | WP_064820013 | lytic transglycosylase domain-containing protein | virB1 |
| AMC88_RS26055 (AMC88_PC00157) | 179919..180218 | + | 300 | WP_007636189 | TrbC/VirB2 family protein | virB2 |
| AMC88_RS26060 (AMC88_PC00158) | 180224..180562 | + | 339 | WP_011053369 | type IV secretion system protein VirB3 | virB3 |
| AMC88_RS26065 (AMC88_PC00159) | 180555..182921 | + | 2367 | WP_064830109 | VirB4 family type IV secretion system protein | virb4 |
| AMC88_RS26070 (AMC88_PC00160) | 182918..183619 | + | 702 | WP_011053371 | P-type DNA transfer protein VirB5 | virB5 |
| AMC88_RS26075 (AMC88_PC00161) | 183616..183849 | + | 234 | WP_008537008 | EexN family lipoprotein | - |
| AMC88_RS26080 (AMC88_PC00162) | 183852..184784 | + | 933 | WP_064820015 | type IV secretion system protein | virB6 |
| AMC88_RS34190 (AMC88_PC00163) | 184826..185107 | + | 282 | WP_081278376 | hypothetical protein | - |
| AMC88_RS26085 (AMC88_PC00164) | 185109..185780 | + | 672 | WP_064820016 | virB8 family protein | virB8 |
| AMC88_RS26090 (AMC88_PC00165) | 185777..186634 | + | 858 | WP_064820017 | P-type conjugative transfer protein VirB9 | virB9 |
| AMC88_RS26095 (AMC88_PC00166) | 186643..187815 | + | 1173 | WP_064820018 | type IV secretion system protein VirB10 | virB10 |
| AMC88_RS26100 (AMC88_PC00167) | 187824..188852 | + | 1029 | WP_064820019 | P-type DNA transfer ATPase VirB11 | virB11 |
| AMC88_RS26105 (AMC88_PC00168) | 188896..189474 | - | 579 | WP_064820020 | PIN domain-containing protein | - |
| AMC88_RS26110 (AMC88_PC00169) | 189464..189910 | - | 447 | WP_225882822 | DNA-binding protein | - |
| AMC88_RS26115 (AMC88_PC00171) | 190424..191614 | - | 1191 | WP_064820021 | DUF1173 domain-containing protein | - |
| AMC88_RS34195 | 191924..192181 | + | 258 | Protein_182 | toprim domain-containing protein | - |
| AMC88_RS26125 | 192506..193446 | + | 941 | Protein_183 | DUF2493 domain-containing protein | - |
| AMC88_RS26130 (AMC88_PC00174) | 193531..193797 | + | 267 | WP_004676093 | hypothetical protein | - |