T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 202872..231928
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CP48_RS01180 (CP48_p01325) | 198445..198732 | + | 288 | WP_000107542 | hypothetical protein | - |
| CP48_RS31165 (CP48_p01330) | 198851..199672 | + | 822 | Protein_240 | DUF932 domain-containing protein | - |
| CP48_RS30255 (CP48_p01340) | 199970..200479 | - | 510 | Protein_241 | transglycosylase SLT domain-containing protein | - |
| CP48_RS01205 (CP48_p01350) | 200894..201271 | + | 378 | WP_001151539 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CP48_RS01210 (CP48_p01355) | 201471..202118 | + | 648 | WP_042966703 | transcriptional regulator TraJ family protein | - |
| CP48_RS01215 (CP48_p01360) | 202237..202464 | + | 228 | WP_000589558 | conjugal transfer relaxosome protein TraY | - |
| CP48_RS01220 (CP48_p01365) | 202498..202857 | + | 360 | WP_000340268 | type IV conjugative transfer system pilin TraA | - |
| CP48_RS01225 (CP48_p01370) | 202872..203183 | + | 312 | WP_000012108 | type IV conjugative transfer system protein TraL | traL |
| CP48_RS01230 (CP48_p01375) | 203205..203771 | + | 567 | WP_000399757 | type IV conjugative transfer system protein TraE | traE |
| CP48_RS01235 (CP48_p01380) | 203758..204486 | + | 729 | WP_001355329 | type-F conjugative transfer system secretin TraK | traK |
| CP48_RS01240 (CP48_p01385) | 204486..205904 | + | 1419 | WP_047088902 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CP48_RS01245 (CP48_p01390) | 205894..206481 | + | 588 | WP_047088903 | conjugal transfer pilus-stabilizing protein TraP | - |
| CP48_RS01250 (CP48_p01395) | 206468..206788 | + | 321 | WP_047088904 | conjugal transfer protein TrbD | - |
| CP48_RS01255 (CP48_p01400) | 206785..207300 | + | 516 | WP_047088905 | type IV conjugative transfer system lipoprotein TraV | traV |
| CP48_RS28155 (CP48_p01405) | 207435..207656 | + | 222 | WP_042966711 | conjugal transfer protein TraR | - |
| CP48_RS01260 (CP48_p01415) | 207816..210443 | + | 2628 | WP_047088906 | type IV secretion system protein TraC | virb4 |
| CP48_RS01265 (CP48_p01420) | 210440..210826 | + | 387 | WP_047088907 | type-F conjugative transfer system protein TrbI | - |
| CP48_RS01270 (CP48_p01425) | 210823..211455 | + | 633 | WP_047088908 | type-F conjugative transfer system protein TraW | traW |
| CP48_RS01275 (CP48_p01430) | 211452..212444 | + | 993 | WP_047088909 | conjugal transfer pilus assembly protein TraU | traU |
| CP48_RS01280 (CP48_p01435) | 212760..214331 | - | 1572 | WP_000381395 | IS66-like element ISCro1 family transposase | - |
| CP48_RS01285 (CP48_p01440) | 214351..214698 | - | 348 | WP_000624622 | IS66 family insertion sequence element accessory protein TnpB | - |
| CP48_RS01290 (CP48_p01445) | 214698..215375 | - | 678 | WP_001339397 | IS66-like element accessory protein TnpA | - |
| CP48_RS01295 (CP48_p01450) | 215375..216091 | - | 717 | WP_065224995 | IS66-like element accessory protein TnpA | - |
| CP48_RS01300 (CP48_p01455) | 216170..216661 | + | 492 | WP_040091623 | hypothetical protein | - |
| CP48_RS01305 (CP48_p01460) | 216688..217326 | + | 639 | WP_040091622 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CP48_RS28165 (CP48_p01465) | 217323..217703 | + | 381 | WP_024213661 | hypothetical protein | - |
| CP48_RS01310 (CP48_p01470) | 217938..219842 | + | 1905 | WP_236927347 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CP48_RS01315 (CP48_p01475) | 219856..220113 | + | 258 | WP_040091333 | conjugal transfer protein TrbE | - |
| CP48_RS01320 (CP48_p01480) | 220106..220849 | + | 744 | WP_040091331 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CP48_RS32860 | 220863..221226 | + | 364 | Protein_268 | hypothetical protein | - |
| CP48_RS01335 (CP48_p01500) | 221605..221886 | + | 282 | WP_000049684 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CP48_RS01340 (CP48_p01505) | 221873..222409 | + | 537 | WP_040091329 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CP48_RS01345 (CP48_p01510) | 222399..222713 | + | 315 | WP_040091328 | P-type conjugative transfer protein TrbJ | - |
| CP48_RS01350 (CP48_p01515) | 222667..223059 | + | 393 | WP_040091326 | F-type conjugal transfer protein TrbF | - |
| CP48_RS01355 (CP48_p01520) | 223046..224419 | + | 1374 | WP_024212142 | conjugal transfer pilus assembly protein TraH | traH |
| CP48_RS01360 (CP48_p01525) | 224416..227238 | + | 2823 | WP_047088737 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CP48_RS01365 (CP48_p01530) | 227254..227751 | + | 498 | WP_040090738 | entry exclusion protein | - |
| CP48_RS01370 (CP48_p01535) | 227783..228514 | + | 732 | WP_040090739 | conjugal transfer complement resistance protein TraT | - |
| CP48_RS01375 (CP48_p01540) | 228574..228834 | + | 261 | WP_040090733 | hypothetical protein | - |
| CP48_RS30265 (CP48_p01545) | 229002..229719 | + | 718 | Protein_278 | hypothetical protein | - |
| CP48_RS01390 (CP48_p01550) | 229775..231928 | + | 2154 | WP_047088736 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CP48_RS01395 (CP48_p01560) | 231937..232335 | - | 399 | WP_040090742 | type II toxin-antitoxin system VapC family toxin | - |
| CP48_RS01400 (CP48_p01565) | 232335..232562 | - | 228 | WP_000450526 | toxin-antitoxin system antitoxin VapB | - |