T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 148284..177310
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO57_RS00755 (CO57_p00890) | 147650..147877 | + | 228 | WP_000450526 | toxin-antitoxin system antitoxin VapB | - |
| CO57_RS00760 (CO57_p00895) | 147877..148275 | + | 399 | WP_000911316 | type II toxin-antitoxin system VapC family toxin | - |
| CO57_RS00765 (CO57_p00900) | 148284..150428 | - | 2145 | WP_000009375 | type IV conjugative transfer system coupling protein TraD | virb4 |
| CO57_RS29820 (CO57_p00905) | 150484..151214 | - | 731 | Protein_154 | hypothetical protein | - |
| CO57_RS00775 (CO57_p00910) | 151449..151928 | - | 480 | WP_001355324 | hypothetical protein | - |
| CO57_RS00780 (CO57_p00915) | 152132..152863 | - | 732 | WP_001364068 | conjugal transfer complement resistance protein TraT | - |
| CO57_RS00785 (CO57_p00920) | 152895..153398 | - | 504 | WP_000605506 | hypothetical protein | - |
| CO57_RS00790 (CO57_p00925) | 153414..156257 | - | 2844 | WP_001006995 | conjugal transfer mating-pair stabilization protein TraG | traG |
| CO57_RS00795 (CO57_p00930) | 156254..157627 | - | 1374 | WP_065275642 | conjugal transfer pilus assembly protein TraH | traH |
| CO57_RS00800 (CO57_p00935) | 157614..158006 | - | 393 | WP_000138366 | F-type conjugal transfer protein TrbF | - |
| CO57_RS00805 (CO57_p00940) | 157960..158274 | - | 315 | WP_001244895 | P-type conjugative transfer protein TrbJ | - |
| CO57_RS00810 (CO57_p00945) | 158264..158800 | - | 537 | WP_000059854 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| CO57_RS00815 (CO57_p00950) | 158787..159071 | - | 285 | WP_000624195 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CO57_RS00820 (CO57_p00955) | 159152..159487 | + | 336 | WP_000415768 | hypothetical protein | - |
| CO57_RS28045 (CO57_p00960) | 159468..159773 | - | 306 | WP_236922840 | conjugal transfer protein TrbA | - |
| CO57_RS00825 (CO57_p00965) | 159818..160561 | - | 744 | WP_001030399 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| CO57_RS00830 (CO57_p00970) | 160554..160811 | - | 258 | WP_000864356 | conjugal transfer protein TrbE | - |
| CO57_RS00835 (CO57_p00975) | 160825..162729 | - | 1905 | WP_000662057 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| CO57_RS30625 (CO57_p00980) | 162757..162975 | + | 219 | WP_001364024 | hypothetical protein | - |
| CO57_RS28050 (CO57_p00985) | 162964..163344 | - | 381 | WP_000009645 | hypothetical protein | - |
| CO57_RS00840 (CO57_p00990) | 163341..163979 | - | 639 | WP_000087541 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| CO57_RS32205 (CO57_p00995) | 164006..164525 | - | 520 | Protein_172 | hypothetical protein | - |
| CO57_RS00850 (CO57_p01005) | 164801..165793 | - | 993 | WP_001355328 | conjugal transfer pilus assembly protein TraU | traU |
| CO57_RS00855 (CO57_p01010) | 165790..166422 | - | 633 | WP_000650119 | type-F conjugative transfer system protein TraW | traW |
| CO57_RS00860 (CO57_p01015) | 166419..166805 | - | 387 | WP_000214089 | type-F conjugative transfer system protein TrbI | - |
| CO57_RS00865 (CO57_p01020) | 166802..169429 | - | 2628 | WP_001064271 | type IV secretion system protein TraC | virb4 |
| CO57_RS28055 (CO57_p01030) | 169589..169810 | - | 222 | WP_001278688 | conjugal transfer protein TraR | - |
| CO57_RS00870 (CO57_p01035) | 169945..170460 | - | 516 | WP_000802746 | type IV conjugative transfer system lipoprotein TraV | traV |
| CO57_RS00875 (CO57_p01040) | 170457..170777 | - | 321 | WP_001057269 | DUF2689 domain-containing protein | - |
| CO57_RS00880 (CO57_p01045) | 170764..171351 | - | 588 | WP_000002892 | conjugal transfer pilus-stabilizing protein TraP | - |
| CO57_RS00885 (CO57_p01050) | 171341..172771 | - | 1431 | WP_000146619 | F-type conjugal transfer pilus assembly protein TraB | traB |
| CO57_RS00890 (CO57_p01055) | 172771..173499 | - | 729 | WP_001355329 | type-F conjugative transfer system secretin TraK | traK |
| CO57_RS00895 (CO57_p01060) | 173486..174052 | - | 567 | WP_000399757 | type IV conjugative transfer system protein TraE | traE |
| CO57_RS00900 (CO57_p01065) | 174074..174385 | - | 312 | WP_000012121 | type IV conjugative transfer system protein TraL | traL |
| CO57_RS00905 (CO57_p01070) | 174400..174759 | - | 360 | WP_000340277 | type IV conjugative transfer system pilin TraA | - |
| CO57_RS00910 (CO57_p01075) | 174793..175020 | - | 228 | WP_001254381 | conjugal transfer relaxosome protein TraY | - |
| CO57_RS00915 (CO57_p01080) | 175114..175800 | - | 687 | WP_000332479 | PAS domain-containing protein | - |
| CO57_RS00920 (CO57_p01085) | 175994..176377 | - | 384 | WP_001151555 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| CO57_RS00925 (CO57_p01090) | 176663..177310 | + | 648 | WP_000614283 | transglycosylase SLT domain-containing protein | virB1 |
| CO57_RS00930 (CO57_p01095) | 177607..178428 | - | 822 | Protein_190 | DUF932 domain-containing protein | - |
| CO57_RS00935 (CO57_p01100) | 178547..178834 | - | 288 | WP_000107535 | hypothetical protein | - |
| CO57_RS00940 (CO57_p01105) | 179085..180089 | + | 1005 | WP_024166184 | IS110 family transposase | - |
| CO57_RS31690 (CO57_p01110) | 180183..180443 | - | 261 | WP_000547943 | hypothetical protein | - |
| CO57_RS31695 | 180513..180685 | + | 173 | Protein_194 | hypothetical protein | - |