T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2019..23174
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM92_RS26425 (WM92_26420) | 2019..3401 | - | 1383 | WP_001309243 | conjugal transfer pilus assembly protein TraH | traH |
| WM92_RS26430 (WM92_26425) | 3379..3771 | - | 393 | WP_000660700 | F-type conjugal transfer protein TrbF | - |
| WM92_RS29735 | 3752..4099 | - | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| WM92_RS26435 (WM92_26430) | 4029..4574 | - | 546 | WP_000059830 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| WM92_RS26440 (WM92_26435) | 4561..4845 | - | 285 | WP_000624107 | type-F conjugative transfer system pilin chaperone TraQ | - |
| WM92_RS26445 (WM92_26440) | 4926..5261 | + | 336 | WP_000736414 | hypothetical protein | - |
| WM92_RS29740 | 5242..5583 | - | 342 | WP_001298557 | conjugal transfer protein TrbA | - |
| WM92_RS26450 (WM92_26445) | 5597..6346 | - | 750 | WP_001323331 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| WM92_RS26455 (WM92_26450) | 6333..6590 | - | 258 | WP_000864314 | conjugal transfer protein TrbE | - |
| WM92_RS26460 (WM92_26455) | 6617..8467 | - | 1851 | WP_000821859 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| WM92_RS26465 (WM92_26460) | 8464..9102 | - | 639 | WP_001080251 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| WM92_RS26470 (WM92_26465) | 9111..9416 | - | 306 | WP_000224418 | hypothetical protein | - |
| WM92_RS26475 (WM92_26470) | 9446..10438 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| WM92_RS26480 (WM92_26475) | 10435..11067 | - | 633 | WP_001203736 | type-F conjugative transfer system protein TraW | traW |
| WM92_RS26485 (WM92_26480) | 11064..11450 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| WM92_RS26490 (WM92_26485) | 11447..14077 | - | 2631 | WP_000069778 | type IV secretion system protein TraC | virb4 |
| WM92_RS32390 | 14203..14416 | - | 214 | Protein_17 | hypothetical protein | - |
| WM92_RS29745 | 14444..14662 | - | 219 | WP_000556746 | hypothetical protein | - |
| WM92_RS26495 (WM92_26490) | 14742..15215 | - | 474 | WP_000549566 | hypothetical protein | - |
| WM92_RS29750 | 15208..15429 | - | 222 | WP_001278694 | conjugal transfer protein TraR | - |
| WM92_RS26500 (WM92_26495) | 15564..16079 | - | 516 | WP_000809888 | type IV conjugative transfer system lipoprotein TraV | traV |
| WM92_RS29755 | 16076..16328 | - | 253 | Protein_22 | conjugal transfer protein TrbG | - |
| WM92_RS26505 (WM92_26500) | 16321..16641 | - | 321 | WP_001057275 | conjugal transfer protein TrbD | virb4 |
| WM92_RS26510 (WM92_26505) | 16628..17218 | - | 591 | WP_000002787 | conjugal transfer pilus-stabilizing protein TraP | - |
| WM92_RS26515 (WM92_26510) | 17208..18635 | - | 1428 | WP_000146665 | F-type conjugal transfer pilus assembly protein TraB | traB |
| WM92_RS26520 (WM92_26515) | 18635..19363 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| WM92_RS26525 (WM92_26520) | 19350..19916 | - | 567 | WP_000399776 | type IV conjugative transfer system protein TraE | traE |
| WM92_RS26530 (WM92_26525) | 19938..20249 | - | 312 | WP_000012100 | type IV conjugative transfer system protein TraL | traL |
| WM92_RS26535 (WM92_26530) | 20264..20623 | - | 360 | WP_001098988 | type IV conjugative transfer system pilin TraA | - |
| WM92_RS26540 (WM92_26535) | 20657..20884 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| WM92_RS29760 | 20978..21664 | - | 687 | WP_000332487 | PAS domain-containing protein | - |
| WM92_RS26550 (WM92_26545) | 21858..22241 | - | 384 | WP_001151562 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| WM92_RS26555 (WM92_26550) | 22584..23174 | + | 591 | WP_000252681 | transglycosylase SLT domain-containing protein | - |
| WM92_RS26560 (WM92_26555) | 23470..24291 | - | 822 | WP_001234489 | DUF932 domain-containing protein | - |
| WM92_RS26565 (WM92_26560) | 24410..24697 | - | 288 | WP_000107526 | hypothetical protein | - |
| WM92_RS32205 (WM92_26565) | 24998..25295 | + | 298 | Protein_36 | hypothetical protein | - |
| WM92_RS31130 (WM92_26570) | 25613..25738 | - | 126 | WP_096937776 | type I toxin-antitoxin system Hok family toxin | - |
| WM92_RS32210 | 25680..25829 | - | 150 | Protein_38 | DUF5431 family protein | - |
| WM92_RS26580 (WM92_26575) | 26003..26766 | - | 764 | Protein_39 | plasmid SOS inhibition protein A | - |
| WM92_RS26585 (WM92_26580) | 26763..27197 | - | 435 | WP_000845910 | conjugation system SOS inhibitor PsiB | - |