T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42886..69183
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E2348C_RS25610 (E2348_P1_043) | 42252..42479 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| E2348C_RS25615 (E2348_P1_044) | 42479..42877 | + | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| E2348C_RS25620 (E2348_P1_045) | 42886..45039 | - | 2154 | WP_000009324 | type IV conjugative transfer system coupling protein TraD | virb4 |
| E2348C_RS25625 (E2348_P1_046) | 45292..46023 | - | 732 | WP_000850423 | conjugal transfer complement resistance protein TraT | - |
| E2348C_RS25630 (E2348_P1_047) | 46037..46546 | - | 510 | WP_000628106 | conjugal transfer entry exclusion protein TraS | - |
| E2348C_RS25635 (E2348_P1_048) | 46543..49368 | - | 2826 | WP_001007001 | conjugal transfer mating-pair stabilization protein TraG | traG |
| E2348C_RS25640 (E2348_P1_049) | 49365..50738 | - | 1374 | WP_000488447 | conjugal transfer pilus assembly protein TraH | traH |
| E2348C_RS25645 (E2348_P1_050) | 50738..51118 | - | 381 | WP_001411063 | F-type conjugal transfer protein TrbF | - |
| E2348C_RS25650 (E2348_P1_051) | 51105..51446 | - | 342 | WP_012477176 | P-type conjugative transfer protein TrbJ | - |
| E2348C_RS25655 (E2348_P1_052) | 51376..51921 | - | 546 | WP_000059835 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| E2348C_RS25660 (E2348_P1_053) | 51908..52192 | - | 285 | WP_000624108 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E2348C_RS25665 (E2348_P1_054) | 52273..52587 | + | 315 | WP_000415570 | hypothetical protein | - |
| E2348C_RS25670 (E2348_P1_055) | 52589..52936 | - | 348 | WP_001287909 | conjugal transfer protein TrbA | - |
| E2348C_RS25675 (E2348_P1_056) | 52952..53695 | - | 744 | WP_001030379 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| E2348C_RS25680 (E2348_P1_057) | 53688..53945 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| E2348C_RS25685 (E2348_P1_058) | 53973..55781 | - | 1809 | WP_000821827 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| E2348C_RS25690 (E2348_P1_059) | 55778..56416 | - | 639 | WP_000777697 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| E2348C_RS25695 (E2348_P1_060) | 56425..57417 | - | 993 | WP_000830821 | conjugal transfer pilus assembly protein TraU | traU |
| E2348C_RS25700 (E2348_P1_061) | 57414..58046 | - | 633 | WP_001203740 | type-F conjugative transfer system protein TraW | traW |
| E2348C_RS25705 (E2348_P1_062) | 58043..58429 | - | 387 | WP_000214079 | type-F conjugative transfer system protein TrbI | - |
| E2348C_RS25710 (E2348_P1_063) | 58426..61053 | - | 2628 | WP_001064253 | type IV secretion system protein TraC | virb4 |
| E2348C_RS28080 (E2348_P1_064) | 61213..61434 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| E2348C_RS25720 (E2348_P1_065) | 61569..62084 | - | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| E2348C_RS25725 (E2348_P1_066) | 62081..62332 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| E2348C_RS25730 (E2348_P1_067) | 62325..62645 | - | 321 | WP_001057294 | conjugal transfer protein TrbD | virb4 |
| E2348C_RS25735 (E2348_P1_068) | 62632..63222 | - | 591 | WP_000002788 | conjugal transfer pilus-stabilizing protein TraP | - |
| E2348C_RS25740 (E2348_P1_069) | 63212..64639 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| E2348C_RS25745 (E2348_P1_070) | 64639..65367 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| E2348C_RS25750 (E2348_P1_071) | 65354..65920 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| E2348C_RS25755 (E2348_P1_072) | 65942..66253 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| E2348C_RS25760 (E2348_P1_073) | 66268..66633 | - | 366 | WP_000340270 | type IV conjugative transfer system pilin TraA | - |
| E2348C_RS25765 (E2348_P1_074) | 66667..66894 | - | 228 | WP_012477178 | conjugal transfer relaxosome protein TraY | - |
| E2348C_RS25770 (E2348_P1_075) | 66989..67675 | - | 687 | WP_000332491 | PAS domain-containing protein | - |
| E2348C_RS25775 (E2348_P1_076) | 67865..68248 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| E2348C_RS25780 (E2348_P1_077) | 68581..69183 | + | 603 | WP_012477179 | transglycosylase SLT domain-containing protein | virB1 |
| E2348C_RS25785 (E2348_P1_078) | 69479..70300 | - | 822 | WP_001234454 | DUF932 domain-containing protein | - |
| E2348C_RS28705 (E2348_P1_079) | 70419..70705 | - | 287 | Protein_84 | hypothetical protein | - |
| E2348C_RS28830 | 70730..70849 | - | 120 | WP_014106970 | hypothetical protein | - |
| E2348C_RS29360 | 70901..71317 | + | 417 | Protein_86 | hypothetical protein | - |
| E2348C_RS28095 (E2348_P1_080) | 71406..71558 | - | 153 | Protein_87 | class I SAM-dependent methyltransferase | - |
| E2348C_RS25805 (E2348_P1_081) | 71571..72944 | - | 1374 | WP_000244358 | IS4-like element ISEc13 family transposase | - |
| E2348C_RS25810 (E2348_P1_082) | 73051..73527 | - | 477 | WP_000556070 | class I SAM-dependent methyltransferase | - |