T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1370..30800
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UG47_RS03875 (UG47_03405) | 65..1219 | + | 1155 | WP_001139957 | site-specific integrase | - |
| UG47_RS03880 (UG47_03410) | 1370..2194 | + | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| UG47_RS03885 (UG47_03415) | 2279..3481 | + | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| UG47_RS03890 (UG47_03420) | 3541..4125 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| UG47_RS03895 (UG47_03425) | 4520..4978 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| UG47_RS03900 (UG47_03430) | 4975..5793 | + | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| UG47_RS03905 (UG47_03435) | 5790..6938 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| UG47_RS03910 | 6935..7225 | + | 291 | WP_001299214 | hypothetical protein | traK |
| UG47_RS03915 (UG47_03440) | 7240..7791 | + | 552 | WP_000014583 | phospholipase D family protein | - |
| UG47_RS03920 (UG47_03445) | 7881..11648 | + | 3768 | WP_001141529 | LPD7 domain-containing protein | - |
| UG47_RS03925 (UG47_03450) | 11666..12013 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| UG47_RS03930 (UG47_03455) | 12010..12702 | + | 693 | WP_000138548 | DotI/IcmL family type IV secretion protein | traM |
| UG47_RS03935 (UG47_03460) | 12713..13696 | + | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| UG47_RS03940 (UG47_03465) | 13699..14988 | + | 1290 | WP_001272005 | conjugal transfer protein TraO | traO |
| UG47_RS03945 (UG47_03470) | 14988..15692 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| UG47_RS03950 (UG47_03475) | 15692..16219 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| UG47_RS03955 (UG47_03480) | 16270..16674 | + | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| UG47_RS03960 (UG47_03485) | 16738..16926 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| UG47_RS03965 (UG47_03490) | 16910..17710 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| UG47_RS03970 (UG47_03495) | 17800..20844 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| UG47_RS03975 (UG47_03500) | 20844..21458 | + | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| UG47_RS03980 (UG47_03505) | 21425..22627 | + | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| UG47_RS03985 (UG47_03510) | 22656..23240 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| UG47_RS03990 (UG47_03515) | 23337..25499 | + | 2163 | WP_000698351 | DotA/TraY family protein | traY |
| UG47_RS03995 (UG47_03520) | 25564..26226 | + | 663 | WP_000653334 | plasmid IncI1-type surface exclusion protein ExcA | - |
| UG47_RS04000 (UG47_03525) | 26298..26507 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| UG47_RS31025 (UG47_03535) | 26899..27075 | + | 177 | WP_001054904 | hypothetical protein | - |
| UG47_RS32100 | 27140..27235 | - | 96 | WP_000609148 | DinQ-like type I toxin DqlB | - |
| UG47_RS04020 (UG47_03545) | 27736..27987 | + | 252 | WP_001291964 | hypothetical protein | - |
| UG47_RS04025 (UG47_03550) | 28059..28211 | - | 153 | WP_001303307 | Hok/Gef family protein | - |
| UG47_RS04030 (UG47_03555) | 28503..29711 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| UG47_RS04035 (UG47_03560) | 29730..30800 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| UG47_RS04040 (UG47_03565) | 30793..33084 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |