T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3976..20246
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9D65_RS28360 (A9D65_24180) | 1..248 | - | 248 | WP_069354188 | IS1-like element transposase | - |
| A9D65_RS17245 (A9D65_24185) | 403..1176 | - | 774 | Protein_1 | IS5-like element ISKpn26 family transposase | - |
| A9D65_RS17250 (A9D65_24190) | 1259..1663 | + | 405 | WP_000839179 | transposase | - |
| A9D65_RS17255 (A9D65_24195) | 1660..2007 | + | 348 | WP_000612626 | IS66 family insertion sequence element accessory protein TnpB | - |
| A9D65_RS17260 (A9D65_24200) | 2056..3595 | + | 1540 | Protein_4 | IS66-like element ISEc22 family transposase | - |
| A9D65_RS28970 | 3634..3846 | - | 213 | Protein_5 | IS5/IS1182 family transposase | - |
| A9D65_RS17265 (A9D65_24205) | 3976..4719 | - | 744 | WP_001030401 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| A9D65_RS17270 (A9D65_24210) | 4712..4969 | - | 258 | WP_000864347 | conjugal transfer protein TrbE | - |
| A9D65_RS17275 (A9D65_24215) | 4996..6846 | - | 1851 | WP_000821866 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| A9D65_RS17280 (A9D65_24220) | 6843..7481 | - | 639 | WP_001080259 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| A9D65_RS17285 (A9D65_24225) | 7490..7795 | - | 306 | WP_000224413 | hypothetical protein | - |
| A9D65_RS17290 (A9D65_24230) | 7825..8817 | - | 993 | WP_000830190 | conjugal transfer pilus assembly protein TraU | traU |
| A9D65_RS17295 (A9D65_24235) | 8814..9446 | - | 633 | WP_001203727 | type-F conjugative transfer system protein TraW | traW |
| A9D65_RS17300 (A9D65_24240) | 9443..9829 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| A9D65_RS17305 (A9D65_24245) | 9826..12453 | - | 2628 | WP_069354187 | type IV secretion system protein TraC | virb4 |
| A9D65_RS27215 | 12613..12834 | - | 222 | WP_001278694 | conjugal transfer protein TraR | - |
| A9D65_RS17310 (A9D65_24250) | 12969..13484 | - | 516 | WP_000809886 | type IV conjugative transfer system lipoprotein TraV | traV |
| A9D65_RS17315 (A9D65_24255) | 13484..13795 | - | 312 | WP_001057272 | conjugal transfer protein TrbD | - |
| A9D65_RS17320 (A9D65_24260) | 13782..14348 | - | 567 | WP_000896601 | conjugal transfer pilus-stabilizing protein TraP | - |
| A9D65_RS17325 (A9D65_24265) | 14338..15789 | - | 1452 | WP_000146687 | F-type conjugal transfer pilus assembly protein TraB | traB |
| A9D65_RS17330 (A9D65_24270) | 15789..16517 | - | 729 | WP_001230808 | type-F conjugative transfer system secretin TraK | traK |
| A9D65_RS17335 (A9D65_24275) | 16504..17070 | - | 567 | WP_000399791 | type IV conjugative transfer system protein TraE | traE |
| A9D65_RS17340 (A9D65_24280) | 17092..17403 | - | 312 | WP_000012107 | type IV conjugative transfer system protein TraL | traL |
| A9D65_RS17345 (A9D65_24285) | 17408..17770 | - | 363 | WP_000338606 | type IV conjugative transfer system pilin TraA | - |
| A9D65_RS17350 (A9D65_24290) | 17804..18031 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| A9D65_RS17355 (A9D65_24295) | 18119..18796 | - | 678 | WP_001348626 | PAS domain-containing protein | - |
| A9D65_RS17360 (A9D65_24300) | 18930..19313 | - | 384 | WP_001151566 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A9D65_RS17365 (A9D65_24305) | 19656..20246 | + | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | virB1 |
| A9D65_RS17370 (A9D65_24310) | 20543..21364 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| A9D65_RS17375 (A9D65_24315) | 21483..21770 | - | 288 | WP_000107535 | hypothetical protein | - |
| A9D65_RS17380 (A9D65_24320) | 21795..22001 | - | 207 | WP_000275859 | hypothetical protein | - |
| A9D65_RS30110 | 22071..22219 | + | 149 | Protein_31 | hypothetical protein | - |