T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 18359..57826
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS40_RS19745 (LS40_19735) | 16075..18366 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| LS40_RS19750 (LS40_19740) | 18359..19429 | - | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| LS40_RS19755 (LS40_19745) | 19448..20656 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| LS40_RS19760 (LS40_19750) | 20963..21742 | - | 780 | WP_275450201 | protein FinQ | - |
| LS40_RS19765 (LS40_19755) | 22369..22521 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| LS40_RS19770 (LS40_19760) | 22593..22844 | - | 252 | WP_001291965 | hypothetical protein | - |
| LS40_RS29845 (LS40_19765) | 23768..23944 | - | 177 | WP_001054900 | hypothetical protein | - |
| LS40_RS19785 (LS40_19775) | 24153..24362 | - | 210 | Protein_28 | hemolysin expression modulator Hha | - |
| LS40_RS19790 (LS40_19780) | 24460..25074 | - | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LS40_RS19795 (LS40_19785) | 25150..27318 | - | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| LS40_RS19800 (LS40_19790) | 27415..27999 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| LS40_RS19805 (LS40_19795) | 28028..29230 | - | 1203 | WP_001189159 | IncI1-type conjugal transfer protein TraW | traW |
| LS40_RS19810 (LS40_19800) | 29197..29811 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| LS40_RS19815 (LS40_19805) | 29811..32855 | - | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| LS40_RS19820 (LS40_19810) | 32945..33745 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LS40_RS19825 (LS40_19815) | 33729..33917 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LS40_RS19830 (LS40_19820) | 33981..34385 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| LS40_RS19835 (LS40_19825) | 34436..34963 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LS40_RS19840 (LS40_19830) | 34963..35667 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| LS40_RS19845 (LS40_19835) | 35667..36956 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| LS40_RS19850 (LS40_19840) | 36959..37942 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| LS40_RS19855 (LS40_19845) | 37953..38645 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| LS40_RS19860 (LS40_19850) | 38642..38989 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| LS40_RS19865 (LS40_19855) | 39007..42774 | - | 3768 | WP_001141539 | LPD7 domain-containing protein | - |
| LS40_RS19870 (LS40_19860) | 42864..43415 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| LS40_RS27970 | 43430..43720 | - | 291 | WP_001299214 | hypothetical protein | traK |
| LS40_RS19875 (LS40_19865) | 43717..44865 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| LS40_RS19880 (LS40_19870) | 44862..45680 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LS40_RS19885 (LS40_19875) | 45677..46135 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LS40_RS19890 (LS40_19880) | 46530..47114 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| LS40_RS19895 (LS40_19885) | 47174..48376 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| LS40_RS19900 (LS40_19890) | 48462..49286 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| LS40_RS19905 (LS40_19895) | 49437..50591 | - | 1155 | WP_047609501 | site-specific integrase | - |
| LS40_RS30305 | 50590..50874 | + | 285 | WP_187642572 | pilus assembly protein PilV | - |
| LS40_RS30645 | 51678..51899 | + | 222 | Protein_55 | prepilin | - |
| LS40_RS19920 (LS40_19910) | 51896..53320 | - | 1425 | WP_024199048 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LS40_RS19925 (LS40_19915) | 53320..53976 | - | 657 | WP_001389386 | prepilin peptidase | - |
| LS40_RS19930 (LS40_19920) | 53961..54521 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LS40_RS19935 (LS40_19925) | 54531..55145 | - | 615 | WP_000959786 | type 4 pilus major pilin | - |
| LS40_RS19940 (LS40_19930) | 55163..56260 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| LS40_RS19945 (LS40_19935) | 56273..57826 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LS40_RS19950 (LS40_19940) | 57837..58289 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| LS40_RS19955 (LS40_19945) | 58276..59571 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| LS40_RS19960 (LS40_19950) | 59564..61246 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LS40_RS19965 (LS40_19955) | 61260..61697 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| LS40_RS19970 (LS40_19960) | 61697..62764 | - | 1068 | WP_047609496 | type IV pilus biogenesis lipoprotein PilL | - |