T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8430..18320
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS40_RS15145 (LS40_15145) | 3895..4158 | + | 264 | WP_052158570 | hypothetical protein | - |
| LS40_RS15150 (LS40_15150) | 4151..4369 | + | 219 | WP_015058250 | hypothetical protein | - |
| LS40_RS29785 | 4465..4809 | + | 345 | WP_015058251 | hypothetical protein | - |
| LS40_RS29790 | 4886..5035 | + | 150 | WP_165839134 | hypothetical protein | - |
| LS40_RS15160 (LS40_15160) | 5051..5308 | + | 258 | WP_015058252 | hypothetical protein | - |
| LS40_RS15165 (LS40_15165) | 5648..6193 | + | 546 | WP_038976855 | DNA distortion polypeptide 1 | - |
| LS40_RS15170 (LS40_15170) | 6196..7353 | + | 1158 | WP_000538023 | DNA distortion polypeptide 2 | - |
| LS40_RS15175 (LS40_15175) | 7714..8205 | + | 492 | WP_000872475 | transcription termination/antitermination NusG family protein | - |
| LS40_RS15180 (LS40_15180) | 8430..9074 | + | 645 | WP_000953539 | lytic transglycosylase domain-containing protein | virB1 |
| LS40_RS15185 (LS40_15185) | 9058..9348 | + | 291 | WP_000921916 | TrbC/VirB2 family protein | virB2 |
| LS40_RS15190 (LS40_15190) | 9372..12131 | + | 2760 | WP_000108725 | VirB3 family type IV secretion system protein | virb4 |
| LS40_RS15195 (LS40_15195) | 12133..12870 | + | 738 | WP_000737859 | type IV secretion system protein | - |
| LS40_RS15200 (LS40_15200) | 12880..13140 | + | 261 | WP_001228869 | EexN family lipoprotein | - |
| LS40_RS15205 (LS40_15205) | 13152..14207 | + | 1056 | WP_000235774 | type IV secretion system protein | virB6 |
| LS40_RS15210 (LS40_15210) | 14397..15119 | + | 723 | WP_000394570 | type IV secretion system protein | virB8 |
| LS40_RS15215 (LS40_15215) | 15125..16054 | + | 930 | WP_000776689 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| LS40_RS15220 (LS40_15220) | 16051..17265 | + | 1215 | WP_001295061 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| LS40_RS15225 (LS40_15225) | 17283..18320 | + | 1038 | WP_000217791 | P-type DNA transfer ATPase VirB11 | virB11 |
| LS40_RS15230 (LS40_15230) | 18325..20160 | + | 1836 | WP_000053826 | type IV secretory system conjugative DNA transfer family protein | - |
| LS40_RS15235 (LS40_15235) | 20157..20552 | + | 396 | WP_000733627 | cag pathogenicity island Cag12 family protein | - |
| LS40_RS30255 | 20555..20887 | + | 333 | WP_000699980 | hypothetical protein | - |
| LS40_RS15245 (LS40_15245) | 21130..21945 | + | 816 | WP_000018321 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| LS40_RS29020 (LS40_15250) | 22099..22395 | - | 297 | WP_226156972 | carcinine hydrolase/isopenicillin-N N-acyltransferase family protein | - |
| LS40_RS29025 (LS40_15255) | 22453..22572 | - | 120 | Protein_27 | IS6 family transposase | - |