T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 14576..40770
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS42_RS01785 (LS42_01785) | 14576..16729 | - | 2154 | WP_047402290 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LS42_RS01790 (LS42_01790) | 16981..17712 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| LS42_RS01795 (LS42_01795) | 17726..18235 | - | 510 | WP_000628100 | conjugal transfer entry exclusion protein TraS | - |
| LS42_RS01800 (LS42_01800) | 18232..21057 | - | 2826 | WP_047402292 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LS42_RS01805 (LS42_01805) | 21054..22427 | - | 1374 | WP_113444820 | conjugal transfer pilus assembly protein TraH | traH |
| LS42_RS01810 (LS42_01810) | 22414..22806 | - | 393 | WP_047402297 | F-type conjugal transfer protein TrbF | - |
| LS42_RS25520 | 22760..23074 | - | 315 | WP_023149603 | P-type conjugative transfer protein TrbJ | - |
| LS42_RS01815 (LS42_01815) | 23064..23618 | - | 555 | WP_047402299 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LS42_RS01820 (LS42_01820) | 23605..23889 | - | 285 | WP_000624105 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LS42_RS01825 (LS42_01825) | 23970..24305 | + | 336 | WP_000415571 | hypothetical protein | - |
| LS42_RS01830 (LS42_01830) | 24286..24627 | - | 342 | WP_047402303 | conjugal transfer protein TrbA | - |
| LS42_RS01835 (LS42_01835) | 24641..25384 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LS42_RS01840 (LS42_01840) | 25377..25634 | - | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| LS42_RS01845 (LS42_01845) | 25661..27469 | - | 1809 | WP_047402305 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LS42_RS01850 (LS42_01850) | 27466..28104 | - | 639 | WP_042047200 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LS42_RS01855 (LS42_01855) | 28113..29105 | - | 993 | WP_042047198 | conjugal transfer pilus assembly protein TraU | traU |
| LS42_RS01860 (LS42_01860) | 29102..29734 | - | 633 | WP_042047196 | type-F conjugative transfer system protein TraW | traW |
| LS42_RS01865 (LS42_01865) | 29731..30117 | - | 387 | WP_000099693 | type-F conjugative transfer system protein TrbI | - |
| LS42_RS01870 (LS42_01870) | 30114..32741 | - | 2628 | WP_001064265 | type IV secretion system protein TraC | virb4 |
| LS42_RS25525 (LS42_01875) | 32901..33122 | - | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LS42_RS01880 (LS42_01880) | 33257..33772 | - | 516 | WP_000724019 | type IV conjugative transfer system lipoprotein TraV | traV |
| LS42_RS01885 (LS42_01885) | 33769..34089 | - | 321 | WP_001057283 | conjugal transfer protein TrbD | - |
| LS42_RS01890 (LS42_01890) | 34076..34663 | - | 588 | WP_000002772 | conjugal transfer pilus-stabilizing protein TraP | - |
| LS42_RS01895 (LS42_01895) | 34653..36080 | - | 1428 | WP_047402310 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LS42_RS01900 (LS42_01900) | 36080..36808 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LS42_RS01905 (LS42_01905) | 36795..37361 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| LS42_RS01910 (LS42_01910) | 37383..37694 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LS42_RS01915 (LS42_01915) | 37699..38061 | - | 363 | WP_000994784 | type IV conjugative transfer system pilin TraA | - |
| LS42_RS01920 (LS42_01920) | 38094..38489 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LS42_RS01925 (LS42_01925) | 38588..39277 | - | 690 | WP_047402313 | conjugal transfer transcriptional regulator TraJ | - |
| LS42_RS01930 (LS42_01930) | 39464..39847 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LS42_RS01935 (LS42_01935) | 40180..40770 | + | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | virB1 |
| LS42_RS01940 (LS42_01940) | 41067..41888 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| LS42_RS01945 (LS42_01945) | 42007..42294 | - | 288 | WP_000107548 | hypothetical protein | - |
| LS42_RS01950 (LS42_01950) | 42545..43549 | + | 1005 | WP_047402339 | IS110 family transposase | - |
| LS42_RS29150 (LS42_01955) | 43643..43903 | - | 261 | WP_042046747 | hypothetical protein | - |
| LS42_RS29155 (LS42_01960) | 43973..44146 | + | 174 | Protein_49 | hypothetical protein | - |
| LS42_RS29160 | 44144..44374 | - | 231 | WP_113707887 | hypothetical protein | - |
| LS42_RS01965 (LS42_01965) | 44594..44719 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LS42_RS29165 | 44661..44810 | - | 150 | Protein_52 | plasmid maintenance protein Mok | - |
| LS42_RS28730 (LS42_01970) | 44832..45020 | + | 189 | WP_001299721 | hypothetical protein | - |
| LS42_RS01975 (LS42_01975) | 44989..45751 | - | 763 | Protein_54 | plasmid SOS inhibition protein A | - |