T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 25924..52118
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LS41_RS20135 (LS41_20135) | 20943..21705 | + | 763 | Protein_33 | plasmid SOS inhibition protein A | - |
| LS41_RS28295 (LS41_20140) | 21674..21862 | - | 189 | WP_001299721 | hypothetical protein | - |
| LS41_RS28675 | 21884..22033 | + | 150 | Protein_35 | plasmid maintenance protein Mok | - |
| LS41_RS20145 (LS41_20145) | 21975..22100 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LS41_RS28680 | 22320..22550 | + | 231 | WP_113707887 | hypothetical protein | - |
| LS41_RS28685 (LS41_20150) | 22548..22721 | - | 174 | Protein_38 | hypothetical protein | - |
| LS41_RS28690 (LS41_20155) | 22791..23051 | + | 261 | WP_042046747 | hypothetical protein | - |
| LS41_RS20160 (LS41_20160) | 23145..24149 | - | 1005 | WP_047402339 | IS110 family transposase | - |
| LS41_RS20165 (LS41_20165) | 24400..24687 | + | 288 | WP_000107548 | hypothetical protein | - |
| LS41_RS20170 (LS41_20170) | 24806..25627 | + | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| LS41_RS20175 (LS41_20175) | 25924..26514 | - | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | virB1 |
| LS41_RS20180 (LS41_20180) | 26847..27230 | + | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LS41_RS20185 (LS41_20185) | 27417..28106 | + | 690 | WP_047402313 | conjugal transfer transcriptional regulator TraJ | - |
| LS41_RS20190 (LS41_20190) | 28205..28600 | + | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| LS41_RS20195 (LS41_20195) | 28633..28995 | + | 363 | WP_000994784 | type IV conjugative transfer system pilin TraA | - |
| LS41_RS20200 (LS41_20200) | 29000..29311 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LS41_RS20205 (LS41_20205) | 29333..29899 | + | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| LS41_RS20210 (LS41_20210) | 29886..30614 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LS41_RS20215 (LS41_20215) | 30614..32041 | + | 1428 | WP_047402310 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LS41_RS20220 (LS41_20220) | 32031..32618 | + | 588 | WP_000002772 | conjugal transfer pilus-stabilizing protein TraP | - |
| LS41_RS20225 (LS41_20225) | 32605..32925 | + | 321 | WP_001057283 | conjugal transfer protein TrbD | - |
| LS41_RS20230 (LS41_20230) | 32922..33437 | + | 516 | WP_000724019 | type IV conjugative transfer system lipoprotein TraV | traV |
| LS41_RS26400 (LS41_20235) | 33572..33793 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LS41_RS20240 (LS41_20240) | 33953..36580 | + | 2628 | WP_001064265 | type IV secretion system protein TraC | virb4 |
| LS41_RS20245 (LS41_20245) | 36577..36963 | + | 387 | WP_000099693 | type-F conjugative transfer system protein TrbI | - |
| LS41_RS20250 (LS41_20250) | 36960..37592 | + | 633 | WP_042047196 | type-F conjugative transfer system protein TraW | traW |
| LS41_RS20255 (LS41_20255) | 37589..38581 | + | 993 | WP_042047198 | conjugal transfer pilus assembly protein TraU | traU |
| LS41_RS20260 (LS41_20260) | 38590..39228 | + | 639 | WP_042047200 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LS41_RS20265 (LS41_20265) | 39225..41033 | + | 1809 | WP_047402305 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LS41_RS20270 (LS41_20270) | 41060..41317 | + | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| LS41_RS20275 (LS41_20275) | 41310..42053 | + | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LS41_RS20280 (LS41_20280) | 42067..42408 | + | 342 | WP_047402303 | conjugal transfer protein TrbA | - |
| LS41_RS20285 (LS41_20285) | 42389..42724 | - | 336 | WP_000415571 | hypothetical protein | - |
| LS41_RS20290 (LS41_20290) | 42805..43089 | + | 285 | WP_000624105 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LS41_RS20295 (LS41_20295) | 43076..43630 | + | 555 | WP_047402299 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LS41_RS26405 | 43620..43934 | + | 315 | WP_023149603 | P-type conjugative transfer protein TrbJ | - |
| LS41_RS20300 (LS41_20300) | 43888..44280 | + | 393 | WP_047402297 | F-type conjugal transfer protein TrbF | - |
| LS41_RS20305 (LS41_20305) | 44267..45640 | + | 1374 | WP_113444820 | conjugal transfer pilus assembly protein TraH | traH |
| LS41_RS20310 (LS41_20310) | 45637..48462 | + | 2826 | WP_047402292 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LS41_RS20315 (LS41_20315) | 48459..48968 | + | 510 | WP_000628100 | conjugal transfer entry exclusion protein TraS | - |
| LS41_RS20320 (LS41_20320) | 48982..49713 | + | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| LS41_RS20325 (LS41_20325) | 49965..52118 | + | 2154 | WP_047402290 | type IV conjugative transfer system coupling protein TraD | virb4 |