T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26512..52320
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEKA_RS29630 (SeKA_D0034) | 26512..28719 | - | 2208 | WP_000009364 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SEKA_RS29635 (SeKA_D0035) | 28971..29702 | - | 732 | WP_001447147 | conjugal transfer complement resistance protein TraT | - |
| SEKA_RS29640 (SeKA_D0036) | 29734..30237 | - | 504 | WP_000605510 | hypothetical protein | - |
| SEKA_RS29645 (SeKA_D0037) | 30252..33074 | - | 2823 | WP_001007012 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SEKA_RS29650 (SeKA_D0038) | 33071..34447 | - | 1377 | WP_000982833 | conjugal transfer pilus assembly protein TraH | traH |
| SEKA_RS29655 (SeKA_D0039) | 34444..34806 | - | 363 | WP_071779407 | P-type conjugative transfer protein TrbJ | - |
| SEKA_RS29660 (SeKA_D0040) | 34736..35281 | - | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SEKA_RS29665 (SeKA_D0041) | 35268..35552 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SEKA_RS29670 (SeKA_D0042) | 35671..36018 | - | 348 | WP_001287676 | conjugal transfer protein TrbA | - |
| SEKA_RS29675 (SeKA_D0043) | 36034..36777 | - | 744 | WP_001030389 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SEKA_RS29680 (SeKA_D0044) | 36770..37027 | - | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| SEKA_RS29685 (SeKA_D0045) | 37054..38862 | - | 1809 | WP_000821846 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SEKA_RS29690 (SeKA_D0046) | 38859..39497 | - | 639 | WP_022630459 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SEKA_RS29695 (SeKA_D0047) | 39506..40498 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| SEKA_RS29700 (SeKA_D0048) | 40495..41127 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| SEKA_RS29705 (SeKA_D0049) | 41124..41510 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| SEKA_RS29710 (SeKA_D0050) | 41507..44134 | - | 2628 | WP_001064251 | type IV secretion system protein TraC | virb4 |
| SEKA_RS29715 (SeKA_D0053) | 44294..44515 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| SEKA_RS29720 (SeKA_D0054) | 44650..45165 | - | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEKA_RS29725 (SeKA_D0055) | 45162..45413 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| SEKA_RS07295 (SeKA_D0056) | 45425..45622 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| SEKA_RS29730 (SeKA_D0057) | 45609..46199 | - | 591 | WP_000002796 | conjugal transfer pilus-stabilizing protein TraP | - |
| SEKA_RS29735 (SeKA_D0058) | 46189..47616 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SEKA_RS29740 (SeKA_D0059) | 47616..48344 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| SEKA_RS29745 (SeKA_D0060) | 48331..48897 | - | 567 | WP_000399785 | type IV conjugative transfer system protein TraE | traE |
| SEKA_RS29750 (SeKA_D0061) | 48919..49230 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| SEKA_RS29755 (SeKA_D0062) | 49245..49610 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| SEKA_RS29760 (SeKA_D0063) | 49643..50038 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| SEKA_RS07300 (SeKA_D0065) | 50137..50826 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| SEKA_RS29765 (SeKA_D0067) | 51013..51396 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SEKA_RS29770 (SeKA_D0068) | 51811..52320 | + | 510 | WP_000759163 | transglycosylase SLT domain-containing protein | virB1 |
| SEKA_RS29775 (SeKA_D0070) | 52616..53437 | - | 822 | WP_001234468 | DUF932 domain-containing protein | - |
| SEKA_RS29780 (SeKA_D0071) | 53556..53843 | - | 288 | WP_000107520 | hypothetical protein | - |
| SEKA_RS07305 | 54144..54441 | + | 298 | Protein_59 | hypothetical protein | - |
| SEKA_RS29785 (SeKA_D0076) | 54742..54864 | - | 123 | WP_223195199 | Hok/Gef family protein | - |
| SEKA_RS33900 | 54809..54961 | - | 153 | Protein_61 | DUF5431 family protein | - |
| SEKA_RS29790 (SeKA_D0077) | 55112..55898 | - | 787 | Protein_62 | plasmid SOS inhibition protein A | - |
| SEKA_RS29795 (SeKA_D0078) | 55895..56329 | - | 435 | WP_000845922 | conjugation system SOS inhibitor PsiB | - |