T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 432..11097
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LSJ_5000 | 194..313 | + | 120 | AIR11889 | Tn916-related conserved hypothetical protein | - |
| LSJ_5001 | 432..1817 | + | 1386 | AIR11890 | Conjugative transposon-related FtsK/SpoIIIE family protein | virb4 |
| LSJ_5002 | 1995..3200 | + | 1206 | AIR11891 | Replication initiation factor | - |
| LSJ_5003 | 3243..3464 | + | 222 | AIR11892 | Hypothetical protein | orf19 |
| LSJ_5004 | 3581..4078 | + | 498 | AIR11893 | Antirestriction (ArdA) protein/ Conjugative transposon protein | - |
| LSJ_5005 | 4053..4559 | + | 507 | AIR11894 | Conjugative transposon membrane protein, TcpE family | orf17a |
| LSJ_5006 | 4543..6990 | + | 2448 | AIR11895 | Conjugative transposon ATP/GTP-binding protein | virb4 |
| LSJ_5007 | 6993..9170 | + | 2178 | AIR11896 | Conjugative transposon membrane protein | orf15 |
| LSJ_5008 | 9167..10168 | + | 1002 | AIR11897 | TN916, NLP/P60 family protein | orf14 |
| LSJ_5009 | 10165..11097 | + | 933 | AIR11898 | Tn916-related hypothetical protein | orf13 |
| LSJ_5010 | 11372..11458 | + | 87 | AIR11899 | Tet (M) leader peptide | - |
| LSJ_5011 | 11474..13393 | + | 1920 | AIR11900 | Tetracycline resistance protein TetM | - |
| LSJ_5012 | 13491..13679 | + | 189 | AIR11901 | Tn916-related hypothetical protein | - |
| LSJ_5013c | 13739..14092 | - | 354 | AIR11902 | Putative DNA binding protein | - |
| LSJ_5014 | 14297..14368 | + | 72 | AIR11903 | Conserved Tn916-related hypothetical protein | - |
| LSJ_5015 | 14597..15019 | + | 423 | AIR11904 | RNA polymerase sigma factor, sigma-70 family, region 4 | - |
| LSJ_5016 | 15016..15246 | + | 231 | AIR11905 | Tn916 hypothetical protein containing a helix-turn-helix motif | - |
| LSJ_5017c | 15310..15438 | - | 129 | AIR11906 | Hypothetical protein | - |
| LSJ_5018c | 15472..15723 | - | 252 | AIR11907 | Tn916-related conserved hypothetical protein | - |
| LSJ_5019 | 15707..15910 | + | 204 | AIR11908 | Tn916 excisionase | - |