T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34677..54376
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_29 | 29700..29828 | + | 129 | CDL73727 | hypothetical protein | - |
| Locus_30 | 29864..30067 | - | 204 | CDL73728 | excisionase | - |
| Locus_31 | 30755..31177 | - | 423 | CDL73729 | putative conjugative transposon regulatory protein | - |
| Locus_32 | 31682..32035 | + | 354 | CDL73730 | putative conjugative transposon regulatory protein | - |
| Locus_33 | 32381..34315 | - | 1935 | CDL73731 | conjugative transposon tetracycline resistance protein | - |
| Locus_34 | 34677..35612 | - | 936 | CDL73732 | putative conjugative transposon exported protein | orf13 |
| Locus_35 | 35609..36610 | - | 1002 | CDL73733 | putative cell wall hydrolase | orf14 |
| Locus_36 | 36607..38718 | - | 2112 | CDL73734 | conjugative transposon membrane protein | orf15 |
| Locus_37 | 38787..41111 | - | 2325 | CDL73735 | conjugative transposon ATP/GTP-binding protein | virb4 |
| Locus_38 | 41218..41448 | - | 231 | CDL73736 | putative conjugative transposon membrane protein | orf17a |
| Locus_39 | 41699..42196 | - | 498 | CDL73737 | conjugative transposon protein | - |
| Locus_40 | 42313..42534 | - | 222 | CDL73738 | conjugative transposon protein | orf19 |
| Locus_41 | 42714..43961 | + | 1248 | CDL73739 | transposase | - |
| Locus_42 | 44218..44955 | - | 738 | CDL73740 | rRNA adenine N-6-methyltransferase | - |
| Locus_43 | 45212..46630 | - | 1419 | CDL73741 | putative conjugative transposon replication initiation factor | - |
| Locus_44 | 46808..48190 | - | 1383 | CDL73742 | conjugative transposon FtsK/SpoIIIE-family protein | virb4 |
| Locus_45 | 48219..48605 | - | 387 | CDL73743 | conjugative transposon protein | orf23 |
| Locus_46 | 48621..48908 | - | 288 | CDL73744 | conjugative transposon protein | orf23 |
| Locus_47 | 49241..49954 | + | 714 | CDL73745 | hypothetical protein | - |
| Locus_48 | 49917..50813 | - | 897 | CDL73746 | HTH-domain DNA binding protein | - |
| Locus_49 | 51976..52617 | + | 642 | CDL73747 | Conserved hypothetical protein | prgL |
| Locus_50 | 52627..53712 | + | 1086 | CDL73748 | conserved hypothetical protein | traP |
| Locus_51 | 53763..53996 | + | 234 | CDL73749 | conserved hypothetical protein | gbs1347 |
| Locus_52 | 53993..54376 | + | 384 | CDL73750 | conserved hypothetical protein | gbs1346 |
| Locus_53 | 54489..54689 | + | 201 | CDL73751 | Conserved hypothetical protein | - |
| Locus_54 | 54771..55403 | + | 633 | CDL73752 | Conserved hypothetical protein | - |
| Locus_55 | 55394..55621 | + | 228 | CDL73753 | Conserved hypothetical protein | - |
| Locus_56 | 55742..55921 | - | 180 | CDL73754 | Conserved hypothetical protein | - |
| Locus_57 | 55991..56362 | + | 372 | CDL73755 | Conserved hypothetical protein | - |
| Locus_58 | 56739..57635 | - | 897 | CDL73756 | Integrase | - |
| Locus_59 | 57729..58979 | + | 1251 | CDL73757 | Conserved hypothetical protein | - |