T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 34676..51527
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_29 | 29863..30066 | - | 204 | CDL73795 | excisionase | - |
| Locus_30 | 30754..31176 | - | 423 | CDL73796 | putative conjugative transposon regulatory protein | - |
| Locus_31 | 31681..32034 | + | 354 | CDL73797 | putative conjugative transposon regulatory protein | - |
| Locus_32 | 32380..34314 | - | 1935 | CDL73798 | conjugative transposon tetracycline resistance protein | - |
| Locus_33 | 34676..35611 | - | 936 | CDL73799 | putative conjugative transposon exported protein | orf13 |
| Locus_34 | 35608..36609 | - | 1002 | CDL73800 | putative cell wall hydrolase | orf14 |
| Locus_35 | 36606..38717 | - | 2112 | CDL73801 | conjugative transposon membrane protein | orf15 |
| Locus_36 | 38786..41110 | - | 2325 | CDL73802 | conjugative transposon ATP/GTP-binding protein | virb4 |
| Locus_37 | 41217..41447 | - | 231 | CDL73803 | putative conjugative transposon membrane protein | orf17a |
| Locus_38 | 41698..42195 | - | 498 | CDL73804 | conjugative transposon protein | - |
| Locus_39 | 42312..42479 | - | 168 | CDL73805 | conjugative transposon protein | orf19 |
| Locus_40 | 42576..43781 | - | 1206 | CDL73806 | putative conjugative transposon replication initiation factor | - |
| Locus_41 | 43959..45341 | - | 1383 | CDL73807 | conjugative transposon FtsK/SpoIIIE-family protein | virb4 |
| Locus_42 | 45370..45756 | - | 387 | CDL73808 | conjugative transposon protein | orf23 |
| Locus_43 | 45772..46059 | - | 288 | CDL73809 | conjugative transposon protein | orf23 |
| Locus_44 | 46392..47105 | + | 714 | CDL73810 | hypothetical protein | - |
| Locus_45 | 47068..47964 | - | 897 | CDL73811 | HTH-domain DNA binding protein | - |
| Locus_46 | 49127..49768 | + | 642 | CDL73812 | Conserved hypothetical protein | prgL |
| Locus_47 | 49778..50863 | + | 1086 | CDL73813 | conserved hypothetical protein | traP |
| Locus_48 | 50914..51147 | + | 234 | CDL73814 | conserved hypothetical protein | gbs1347 |
| Locus_49 | 51144..51527 | + | 384 | CDL73815 | conserved hypothetical protein | gbs1346 |
| Locus_50 | 51640..51840 | + | 201 | CDL73816 | conserved hypothetical protein | - |
| Locus_51 | 51922..52554 | + | 633 | CDL73817 | Conserved hypothetical protein | - |
| Locus_52 | 52545..52772 | + | 228 | CDL73818 | Conserved hypothetical protein | - |
| Locus_53 | 52893..53072 | - | 180 | CDL73819 | Conserved hypothetical protein | - |
| Locus_54 | 53142..53513 | + | 372 | CDL73820 | Conserved hypothetical protein | - |
| Locus_55 | 53890..54786 | - | 897 | CDL73821 | Integrase | - |
| Locus_56 | 54880..55452 | + | 573 | CDL73822 | Conserved hypothetical protein | - |