T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2729..35527
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_0 | 1..42 | + | 42 | Protein_0 | 23S rRNA (uracil-5-)-methyltransferase RumA (fragment) | - |
| Locus_1 | 9..176 | + | 168 | CCJ27726 | putative uncharacterized protein | - |
| Locus_2 | 253..426 | + | 174 | CCJ27727 | putative uncharacterized protein | - |
| Locus_3 | 423..1241 | + | 819 | CCJ27728 | replication initiator protein | - |
| Locus_4 | 1390..2745 | + | 1356 | CCJ27729 | cytosine-specific methyltransferase | - |
| Locus_5 | 2729..3157 | + | 429 | CCJ27730 | putative uncharacterized protein | gbs1369 |
| Locus_6 | 3168..3551 | + | 384 | CCJ27731 | putative uncharacterized protein | - |
| Locus_7 | 3560..3793 | + | 234 | CCJ27732 | putative uncharacterized protein | - |
| Locus_8 | 3796..4380 | + | 585 | CCJ27733 | CAAX amino terminal protease self-immunity protein | - |
| Locus_9 | 4421..4945 | + | 525 | CCJ27734 | putative uncharacterized protein | gbs1365 |
| Locus_10 | 4945..6761 | + | 1817 | Protein_10 | conjugal transfer protein TraG | - |
| Locus_11 | 6767..7021 | + | 255 | CCJ27736 | putative membrane protein | prgF |
| Locus_12 | 7045..7899 | + | 855 | CCJ27737 | putative plasmid conjugal transfer protein,TrbL/VirB6 family | prgHb |
| Locus_13 | 7859..8314 | + | 456 | CCJ27738 | putative uncharacterized protein | prgIc |
| Locus_14 | 8292..10622 | + | 2331 | CCJ27739 | putative conjugal transfer protein | virb4 |
| Locus_15 | 10624..13425 | + | 2802 | CCJ27740 | N-acetylmuramoyl L-alanine amidase | prgK |
| Locus_17 | 13838..15037 | + | 1200 | CCJ27742 | putative uncharacterized protein | - |
| Locus_18 | 15059..15271 | + | 213 | CCJ27743 | putative uncharacterized protein | - |
| Locus_19 | 15346..15822 | + | 477 | CCJ27744 | putative uncharacterized protein | cd411 |
| Locus_20 | 15819..17513 | + | 1695 | CCJ27745 | putative conjugal transfer protein, TraG/TraD family | - |
| Locus_21 | 17672..17920 | + | 249 | CCJ27746 | putative conjugal transfer protein | prgF |
| Locus_22 | 18003..18875 | + | 873 | CCJ27747 | membrane protein, putative conjugative transfer protein | prgHa |
| Locus_23 | 18906..19448 | + | 543 | CCJ27748 | adenine-specific methyltransferase | - |
| Locus_24 | 19462..19884 | + | 423 | CCJ27749 | putative uncharacterized protein | prgIa |
| Locus_25 | 19814..22213 | + | 2400 | CCJ27750 | putative conjugal transfer protein | virb4 |
| Locus_26 | 22245..24236 | + | 1992 | CCJ27751 | DNA-repair protein | cd419a |
| Locus_27 | 24259..24510 | + | 252 | CCJ27752 | putative uncharacterized protein | - |
| Locus_28 | 24500..25729 | + | 1230 | CCJ27753 | putative bacteriocin | - |
| Locus_29 | 25726..36520 | + | 10795 | CCJ27754 | DNA topoisomerase (pseudogene) | - |
| Locus_30 | 27204..29066 | + | 1863 | CCJ27755 | TnpX site-specific recombinase | - |
| Locus_31 | 29253..29549 | + | 297 | CCJ27756 | putative uncharacterized protein | - |
| Locus_32 | 29680..30733 | + | 1054 | CCJ27757 | transposase, IS30 family (pseudogene) | - |
| Locus_33 | 30982..31470 | + | 489 | CCJ27758 | putative VanZ family protein | - |
| Locus_34 | 31555..31881 | + | 327 | CCJ27759 | putative uncharacterized protein | - |
| Locus_35 | 32121..33629 | + | 1509 | CCJ27760 | putative mobilization protein, conjugal transfer protein | - |
| Locus_36 | 33626..35527 | + | 1902 | CCJ27761 | putative DNA primase | traP |
| Locus_37 | 35646..35837 | + | 192 | CCJ27762 | putative uncharacterized protein | - |