T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 154897..180871
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS558_RS00625 (pSmeSM11b_p131) | 150415..151227 | + | 813 | WP_012477325 | IS21-like element ISRm9 family helper ATPase IstB | - |
| HS558_RS00630 (pSmeSM11b_p132) | 151558..151770 | + | 213 | Protein_128 | zincin-like metallopeptidase domain-containing protein | - |
| HS558_RS00635 | 151774..151947 | - | 174 | WP_017273099 | hypothetical protein | - |
| HS558_RS00640 (pSmeSM11b_p133) | 152405..152713 | + | 309 | WP_012477327 | DUF736 domain-containing protein | - |
| HS558_RS00645 | 153034..153204 | + | 171 | WP_017273098 | hypothetical protein | - |
| HS558_RS00650 (pSmeSM11b_p135) | 153467..153640 | + | 174 | WP_012477329 | hypothetical protein | - |
| HS558_RS00655 (pSmeSM11b_p136) | 153678..154166 | - | 489 | WP_017273097 | thermonuclease family protein | - |
| HS558_RS00660 (pSmeSM11b_p137) | 154202..154468 | - | 267 | WP_012477331 | WGR domain-containing protein | - |
| HS558_RS00665 (pSmeSM11b_p139) | 154683..154916 | - | 234 | WP_012477333 | hypothetical protein | - |
| HS558_RS00670 (pSmeSM11b_p140) | 154897..156855 | - | 1959 | WP_012477334 | Ti-type conjugative transfer system protein TraG | virb4 |
| HS558_RS00675 (pSmeSM11b_p141) | 156842..157057 | - | 216 | WP_017273095 | type IV conjugative transfer system coupling protein TraD | - |
| HS558_RS00680 (pSmeSM11b_p142) | 157062..157325 | - | 264 | WP_012477336 | TraC family protein | - |
| HS558_RS00685 (pSmeSM11b_p143) | 157577..161209 | + | 3633 | WP_012477337 | Ti-type conjugative transfer relaxase TraA | - |
| HS558_RS00690 (pSmeSM11b_p144) | 161266..161772 | + | 507 | WP_012477338 | conjugative transfer signal peptidase TraF | - |
| HS558_RS00695 (pSmeSM11b_p145) | 161762..162928 | + | 1167 | WP_012477339 | conjugal transfer protein TraB | - |
| HS558_RS00700 (pSmeSM11b_p146) | 162943..163560 | + | 618 | WP_012477340 | TraH family protein | virB1 |
| HS558_RS00705 (pSmeSM11b_p147) | 163620..164426 | + | 807 | WP_012477341 | DUF3800 domain-containing protein | - |
| HS558_RS00710 (pSmeSM11b_p148) | 164732..166261 | + | 1530 | WP_012477342 | IS21 family transposase | - |
| HS558_RS00715 (pSmeSM11b_p149) | 166274..167011 | + | 738 | WP_012477343 | IS21-like element helper ATPase IstB | - |
| HS558_RS00720 (pSmeSM11b_p150) | 167198..168193 | - | 996 | WP_017273092 | alpha/beta hydrolase | - |
| HS558_RS00725 (pSmeSM11b_p151) | 168183..169793 | - | 1611 | WP_026030850 | hypothetical protein | - |
| HS558_RS00730 (pSmeSM11b_p153) | 170098..170811 | + | 714 | WP_012477347 | autoinducer binding domain-containing protein | - |
| HS558_RS00735 (pSmeSM11b_p154) | 170812..171111 | - | 300 | WP_012477348 | transcriptional repressor TraM | - |
| HS558_RS00740 (pSmeSM11b_p155) | 171319..172617 | - | 1299 | WP_012477349 | IncP-type conjugal transfer protein TrbI | virB10 |
| HS558_RS00745 (pSmeSM11b_p156) | 172633..173079 | - | 447 | WP_012477350 | conjugal transfer protein TrbH | - |
| HS558_RS00750 (pSmeSM11b_p157) | 173083..173913 | - | 831 | WP_012477351 | P-type conjugative transfer protein TrbG | virB9 |
| HS558_RS00755 (pSmeSM11b_p158) | 173929..174591 | - | 663 | WP_012477352 | conjugal transfer protein TrbF | virB8 |
| HS558_RS00760 (pSmeSM11b_p159) | 174613..175794 | - | 1182 | WP_012477353 | P-type conjugative transfer protein TrbL | virB6 |
| HS558_RS00765 (pSmeSM11b_p160) | 175788..175943 | - | 156 | WP_234705592 | entry exclusion protein TrbK | - |
| HS558_RS00770 (pSmeSM11b_p161) | 175988..176794 | - | 807 | WP_012477355 | P-type conjugative transfer protein TrbJ | virB5 |
| HS558_RS00775 (pSmeSM11b_p163) | 176787..179221 | - | 2435 | Protein_157 | conjugal transfer protein TrbE | - |
| HS558_RS00780 (pSmeSM11b_p164) | 179232..179531 | - | 300 | WP_012477358 | conjugal transfer protein TrbD | virB3 |
| HS558_RS00785 (pSmeSM11b_p165) | 179524..179916 | - | 393 | WP_017273081 | TrbC/VirB2 family protein | virB2 |
| HS558_RS00790 (pSmeSM11b_p166) | 179906..180871 | - | 966 | WP_012477360 | P-type conjugative transfer ATPase TrbB | virB11 |